Strain Fitness in Shewanella loihica PV-4 around Shew_1566

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,795,783	+		Shew_1564	0.23	-0.5
1,795,807	+		Shew_1564	0.34	-2.6
1,796,125	+				-0.7
1,796,133	-				-1.1
1,796,466	+				-1.4
1,796,474	+				-0.8
1,797,443	-		Shew_1566	0.40	-1.3
1,797,480	+		Shew_1566	0.42	-0.1
1,797,916	+		Shew_1566	0.61	-2.1
1,798,105	+		Shew_1566	0.70	-0.5
1,798,107	+		Shew_1566	0.70	-2.0
1,799,535	-		Shew_1568	0.25	+0.1
1,799,535	-		Shew_1568	0.25	-0.3
1,799,644	-		Shew_1568	0.41	+0.0
1,799,763	+		Shew_1568	0.57	-0.2