Strain Fitness in Shewanella loihica PV-4 around Shew_1433

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,646,698	+		Shew_1431	0.36	-0.4
1,646,901	-		Shew_1431	0.81	-3.5
1,646,901	-		Shew_1431	0.81	+0.6
1,647,279	-		Shew_1432	0.38	-0.1
1,647,640	+				+0.3
1,647,759	+		Shew_1433	0.14	-2.6
1,647,834	+		Shew_1433	0.21	-2.2
1,647,847	-		Shew_1433	0.22	-1.8
1,648,313	-		Shew_1433	0.68	-1.8
1,648,315	+		Shew_1433	0.69	-2.2
1,648,315	+		Shew_1433	0.69	-1.9
1,648,323	-		Shew_1433	0.69	-1.8
1,648,585	-				-3.0
1,648,637	+				-1.4
1,649,220	-		Shew_1434	0.64	-0.5