Strain Fitness in Shewanella loihica PV-4 around Shew_1129

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,303,919	+				+0.2
1,304,125	+				+0.9
1,304,207	+				-0.4
1,304,366	-				-0.2
1,304,510	+				+0.8
1,304,578	-				-0.4
1,304,663	+		Shew_1129	0.21	-0.5
1,304,671	-		Shew_1129	0.22	+0.0
1,304,754	-		Shew_1129	0.34	+0.4
1,304,829	+		Shew_1129	0.44	-1.4
1,304,837	-		Shew_1129	0.46	+0.4
1,305,358	+				-2.6
1,305,762	-		Shew_1130	0.22	+0.5
1,305,762	-		Shew_1130	0.22	+0.4