Strain Fitness in Shewanella loihica PV-4 around Shew_1018

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,176,829	+		Shew_1016	0.67	-0.0
1,176,854	-		Shew_1016	0.70	+0.2
1,176,895	-		Shew_1016	0.74	+0.1
1,176,983	-		Shew_1016	0.84	+0.4
1,177,713	-		Shew_1018	0.24	+0.6
1,177,744	+		Shew_1018	0.30	+0.0
1,178,060	-				-1.5
1,178,154	-				-1.0
1,178,298	-		Shew_1019	0.42	+0.0
1,178,438	-		Shew_1019	0.78	-0.8
1,178,576	-				-0.2
1,178,603	+				-0.2
1,178,644	+				-0.4
1,178,841	-	anmK	Shew_1020	0.16	+0.7
1,178,894	+	anmK	Shew_1020	0.21	+0.7
1,179,022	-	anmK	Shew_1020	0.32	+0.8