Strain Fitness in Shewanella loihica PV-4 around Shew_0973

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,116,745	+		Shew_0972	0.49	+2.0
1,117,030	-		Shew_0972	0.70	-0.3
1,117,157	+		Shew_0972	0.80	-0.3
1,117,175	-		Shew_0972	0.81	+0.1
1,117,495	-				+0.1
1,117,612	-				-0.7
1,117,750	-				-1.3
1,117,835	+		Shew_0973	0.12	-1.3
1,118,054	+		Shew_0973	0.32	-1.5
1,118,112	+		Shew_0973	0.37	-2.8
1,118,129	+		Shew_0973	0.38	-0.4
1,118,199	-		Shew_0973	0.45	-2.0
1,118,232	+		Shew_0973	0.48	-1.5
1,118,707	+				-2.0
1,118,707	+				-3.5
1,118,757	+				+2.2
1,118,816	+				-1.3
1,119,146	+		Shew_0974	0.21	+0.1
1,119,322	+		Shew_0974	0.37	-1.7
1,119,324	-		Shew_0974	0.37	+0.1
1,119,663	+		Shew_0974	0.67	+0.1
1,119,761	+		Shew_0974	0.75	-0.2