Strain Fitness in Shewanella loihica PV-4 around Shew_0949

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
1,089,643	+				+0.8
1,089,643	+				+0.9
1,089,778	+		Shew_0948	0.30	+0.3
1,089,838	+		Shew_0948	0.39	-0.1
1,090,070	+		Shew_0948	0.76	-0.3
1,090,635	-		Shew_0949	0.26	-0.1
1,090,705	+		Shew_0949	0.37	-0.0
1,090,713	-		Shew_0949	0.38	+0.4
1,090,713	-		Shew_0949	0.38	-0.2
1,090,730	+		Shew_0949	0.41	-0.4
1,090,842	+		Shew_0949	0.57	+0.4
1,090,895	+		Shew_0949	0.65	-0.4
1,091,091	-				+0.4
1,091,702	-		Shew_0950	0.33	-1.8
1,091,970	-		Shew_0950	0.53	-0.6