Strain Fitness in Shewanella loihica PV-4 around Shew_0331

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
375,198	-		Shew_0330	0.48	+4.3
375,718	+				+1.1
376,177	-	prmA	Shew_0331	0.37	-1.6
376,548	+	prmA	Shew_0331	0.79	+0.2
376,608	-	prmA	Shew_0331	0.86	-0.0
376,641	-	prmA	Shew_0331	0.90	-0.5
377,129	-				-2.1
377,129	-				-0.2
377,256	+		Shew_0332	0.24	+0.2
377,292	+		Shew_0332	0.29	-0.0
377,292	+		Shew_0332	0.29	-0.7
377,300	-		Shew_0332	0.31	-0.0
377,300	-		Shew_0332	0.31	-0.1
377,646	+		Shew_0332	0.78	-0.5