Strain Fitness in Shewanella loihica PV-4 around Shew_0277

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
293,649	+		Shew_0276	0.59	-0.1
293,649	+		Shew_0276	0.59	-0.0
293,657	-		Shew_0276	0.59	+4.1
293,664	+		Shew_0276	0.60	-0.4
293,745	+		Shew_0276	0.65	-0.2
293,753	-		Shew_0276	0.66	+0.8
294,134	-				-1.7
294,202	+				+0.1
294,301	+				-0.4
294,378	+				+0.5
294,434	+				+0.0
294,443	-				-0.4
294,722	+		Shew_0277	0.15	+0.0
294,932	-		Shew_0277	0.42	+0.0
294,953	-		Shew_0277	0.44	+0.5
294,955	-		Shew_0277	0.45	+0.3
294,964	+		Shew_0277	0.46	+0.0
295,250	-		Shew_0277	0.82	+0.6
295,315	-				+0.2
295,331	+				+0.3
295,337	-				-0.7
295,339	-				-0.2
295,414	-				-0.0
295,520	-				-1.8
295,520	-				+0.0
295,520	-				-0.2
295,633	-				+0.8
295,728	+				+0.5
295,779	+				-0.1
295,872	-		Shew_0278	0.18	-0.1
295,926	+		Shew_0278	0.23	-0.2
295,926	+		Shew_0278	0.23	-0.6
296,070	+		Shew_0278	0.36	+0.2
296,140	-		Shew_0278	0.42	+0.2