Strain Fitness in Shewanella loihica PV-4 around Shew_0071

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
84,106	+		Shew_0070	0.36	-0.9
84,204	+		Shew_0070	0.45	-0.8
84,270	-		Shew_0070	0.51	-0.5
84,282	-		Shew_0070	0.52	-0.2
84,519	-		Shew_0070	0.72	-0.2
84,540	-		Shew_0070	0.74	-0.3
84,624	-		Shew_0070	0.81	+0.1
84,688	+		Shew_0070	0.86	+0.1
84,742	-				-0.1
84,795	-				-0.3
84,933	-				+0.4
85,084	+				+0.1
85,118	-				-1.5
85,120	+				+0.8
85,259	+		Shew_0071	0.24	-0.4
85,267	-		Shew_0071	0.25	+0.4
85,286	+		Shew_0071	0.27	-0.7
85,385	+		Shew_0071	0.39	-0.5
85,398	-		Shew_0071	0.40	-0.2
85,460	+		Shew_0071	0.47	-3.3
85,562	+		Shew_0071	0.59	-0.7
85,570	-		Shew_0071	0.60	+0.0
85,570	-		Shew_0071	0.60	-0.8
85,585	-		Shew_0071	0.62	-0.5
85,660	+		Shew_0071	0.70	-0.7
85,696	-		Shew_0071	0.75	+0.0
85,720	+		Shew_0071	0.77	-0.9
85,728	-		Shew_0071	0.78	+0.4
85,801	+		Shew_0071	0.87	-0.2
85,894	+				-0.3
86,224	+		Shew_0072	0.57	+0.0
86,231	+		Shew_0072	0.59	-2.3
86,231	+		Shew_0072	0.59	+1.1
86,231	+		Shew_0072	0.59	+0.6
86,231	+		Shew_0072	0.59	-0.6
86,231	+		Shew_0072	0.59	-0.1
86,234	-		Shew_0072	0.59	+0.4
86,239	-		Shew_0072	0.60	+1.0
86,292	+		Shew_0072	0.70	-0.5
86,389	+		Shew_0072	0.89	+0.3
86,676	-				-0.1
86,823	-				-1.2
86,869	+				-0.2
86,882	-				+1.6