Strain Fitness in Shewanella loihica PV-4 around Shew_0043

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
50,464	+				-0.9
50,472	-				+0.6
50,482	+				+0.0
50,580	+				-0.8
50,876	-		Shew_0042	0.23	+0.1
50,945	-		Shew_0042	0.36	-0.2
51,176	+		Shew_0042	0.80	+0.7
51,214	+		Shew_0042	0.87	+0.6
51,214	+		Shew_0042	0.87	+0.6
51,222	-		Shew_0042	0.89	-0.3
51,321	-				+0.6
51,326	-				-0.8
51,336	-				-0.0
51,399	-				-1.0
51,417	+				+0.8
51,519	-		Shew_0043	0.59	-1.1
51,522	+		Shew_0043	0.60	-1.2
51,789	-				+0.2
52,086	-				+0.1
52,086	-				-1.1
52,090	+				-0.3
52,090	+				+0.4
52,312	+		Shew_0044	0.16	-0.7
52,537	-		Shew_0044	0.23	+0.2