Strain Fitness in Shewanella loihica PV-4 around Shew_0020

Experiment: methylglyoxal 0.001 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	methylglyoxal 0.001 vol%
22,707	+	fadB	Shew_0019	0.78	+0.5
22,766	+	fadB	Shew_0019	0.80	+0.1
22,771	+	fadB	Shew_0019	0.81	+0.5
23,389	+				-0.3
23,460	+				-0.3
23,460	+				-0.1
23,468	-				-2.1
23,512	+				-0.4
23,520	-				-1.1
23,552	+				-0.5
23,562	+				-0.8
23,724	+		Shew_0020	0.17	-0.9
23,937	-		Shew_0020	0.33	-1.6
23,986	-		Shew_0020	0.37	-1.7
24,110	+		Shew_0020	0.46	-0.5
24,172	-		Shew_0020	0.51	-2.7
24,177	-		Shew_0020	0.52	-0.9
24,321	+		Shew_0020	0.62	-0.6
24,329	-		Shew_0020	0.63	-1.1
24,374	-		Shew_0020	0.66	-1.0
24,428	+		Shew_0020	0.71	+0.1
24,449	-		Shew_0020	0.72	-1.5
24,475	-		Shew_0020	0.74	-1.0
24,566	-		Shew_0020	0.81	-0.8
24,811	-				-0.9
25,148	+		Shew_0021	0.51	-0.5
25,223	-		Shew_0021	0.64	-1.0
25,227	+		Shew_0021	0.64	-1.5
25,283	-		Shew_0021	0.73	-1.2
25,307	+		Shew_0021	0.77	-1.2
25,365	+		Shew_0021	0.87	-0.6
25,375	+		Shew_0021	0.88	+0.2
25,375	+		Shew_0021	0.88	+1.0
25,418	-				-3.4
25,462	-				-0.7
25,795	+		Shew_0022	0.13	+1.9