Experiment: m.b. Zinc 0.3 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1827 and Dshi_1828 are separated by 138 nucleotides Dshi_1828 and Dshi_1829 are separated by 24 nucleotides
Dshi_1827: Dshi_1827 - hypothetical protein (RefSeq), at 1,906,223 to 1,907,263
_1827
Dshi_1828: Dshi_1828 - thiamine pyrophosphate protein central region (RefSeq), at 1,907,402 to 1,909,183
_1828
Dshi_1829: Dshi_1829 - FAD dependent oxidoreductase (RefSeq), at 1,909,208 to 1,910,602
_1829
Position (kb)
1907
1908
1909
1910 Strain fitness (log2 ratio)
-1
0
1 at 1906.498 kb on + strand, within Dshi_1827 at 1906.552 kb on - strand, within Dshi_1827 at 1906.574 kb on + strand, within Dshi_1827 at 1906.583 kb on + strand, within Dshi_1827 at 1906.583 kb on + strand, within Dshi_1827 at 1906.633 kb on - strand, within Dshi_1827 at 1906.647 kb on - strand, within Dshi_1827 at 1906.862 kb on + strand, within Dshi_1827 at 1906.878 kb on + strand, within Dshi_1827 at 1906.912 kb on - strand, within Dshi_1827 at 1906.945 kb on + strand, within Dshi_1827 at 1906.960 kb on + strand, within Dshi_1827 at 1906.974 kb on - strand, within Dshi_1827 at 1906.974 kb on - strand, within Dshi_1827 at 1906.984 kb on + strand, within Dshi_1827 at 1907.034 kb on + strand, within Dshi_1827 at 1907.043 kb on - strand, within Dshi_1827 at 1907.074 kb on - strand, within Dshi_1827 at 1907.253 kb on + strand at 1907.365 kb on + strand at 1907.368 kb on - strand at 1907.556 kb on + strand at 1907.564 kb on - strand at 1907.621 kb on - strand, within Dshi_1828 at 1907.684 kb on + strand, within Dshi_1828 at 1907.684 kb on + strand, within Dshi_1828 at 1907.692 kb on - strand, within Dshi_1828 at 1907.886 kb on + strand, within Dshi_1828 at 1907.886 kb on + strand, within Dshi_1828 at 1907.986 kb on - strand, within Dshi_1828 at 1907.996 kb on - strand, within Dshi_1828 at 1908.200 kb on + strand, within Dshi_1828 at 1908.258 kb on + strand, within Dshi_1828 at 1908.266 kb on - strand, within Dshi_1828 at 1908.285 kb on - strand, within Dshi_1828 at 1908.331 kb on - strand, within Dshi_1828 at 1908.358 kb on + strand, within Dshi_1828 at 1908.436 kb on - strand, within Dshi_1828 at 1908.562 kb on + strand, within Dshi_1828 at 1908.572 kb on + strand, within Dshi_1828 at 1908.594 kb on + strand, within Dshi_1828 at 1908.671 kb on - strand, within Dshi_1828 at 1908.671 kb on - strand, within Dshi_1828 at 1908.673 kb on + strand, within Dshi_1828 at 1908.686 kb on + strand, within Dshi_1828 at 1908.796 kb on + strand, within Dshi_1828 at 1909.228 kb on + strand at 1909.255 kb on + strand at 1909.346 kb on + strand at 1909.349 kb on - strand, within Dshi_1829 at 1909.381 kb on + strand, within Dshi_1829 at 1909.451 kb on + strand, within Dshi_1829 at 1909.467 kb on - strand, within Dshi_1829 at 1909.499 kb on - strand, within Dshi_1829 at 1909.634 kb on - strand, within Dshi_1829 at 1909.664 kb on + strand, within Dshi_1829 at 1909.808 kb on - strand, within Dshi_1829 at 1909.833 kb on + strand, within Dshi_1829 at 1909.963 kb on + strand, within Dshi_1829 at 1909.980 kb on + strand, within Dshi_1829 at 1910.073 kb on + strand, within Dshi_1829 at 1910.083 kb on - strand, within Dshi_1829 at 1910.085 kb on + strand, within Dshi_1829 at 1910.104 kb on - strand, within Dshi_1829 at 1910.130 kb on + strand, within Dshi_1829 at 1910.130 kb on + strand, within Dshi_1829
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Zinc 0.3 mM remove 1,906,498 + Dshi_1827 0.26 -0.1 1,906,552 - Dshi_1827 0.32 +0.7 1,906,574 + Dshi_1827 0.34 +1.0 1,906,583 + Dshi_1827 0.35 +0.5 1,906,583 + Dshi_1827 0.35 +0.5 1,906,633 - Dshi_1827 0.39 +0.3 1,906,647 - Dshi_1827 0.41 +0.1 1,906,862 + Dshi_1827 0.61 -0.6 1,906,878 + Dshi_1827 0.63 -1.0 1,906,912 - Dshi_1827 0.66 +0.2 1,906,945 + Dshi_1827 0.69 +0.4 1,906,960 + Dshi_1827 0.71 +0.5 1,906,974 - Dshi_1827 0.72 +0.5 1,906,974 - Dshi_1827 0.72 +1.1 1,906,984 + Dshi_1827 0.73 -0.6 1,907,034 + Dshi_1827 0.78 -0.3 1,907,043 - Dshi_1827 0.79 -0.4 1,907,074 - Dshi_1827 0.82 +1.0 1,907,253 + +1.1 1,907,365 + -0.5 1,907,368 - -0.7 1,907,556 + -0.0 1,907,564 - +0.5 1,907,621 - Dshi_1828 0.12 -0.3 1,907,684 + Dshi_1828 0.16 -1.1 1,907,684 + Dshi_1828 0.16 +0.4 1,907,692 - Dshi_1828 0.16 -0.2 1,907,886 + Dshi_1828 0.27 +0.1 1,907,886 + Dshi_1828 0.27 -0.1 1,907,986 - Dshi_1828 0.33 +0.7 1,907,996 - Dshi_1828 0.33 -0.0 1,908,200 + Dshi_1828 0.45 -0.1 1,908,258 + Dshi_1828 0.48 -1.1 1,908,266 - Dshi_1828 0.48 -0.1 1,908,285 - Dshi_1828 0.50 -0.3 1,908,331 - Dshi_1828 0.52 +0.4 1,908,358 + Dshi_1828 0.54 -0.7 1,908,436 - Dshi_1828 0.58 -0.5 1,908,562 + Dshi_1828 0.65 -0.7 1,908,572 + Dshi_1828 0.66 -1.0 1,908,594 + Dshi_1828 0.67 -0.2 1,908,671 - Dshi_1828 0.71 -0.3 1,908,671 - Dshi_1828 0.71 -0.7 1,908,673 + Dshi_1828 0.71 -0.5 1,908,686 + Dshi_1828 0.72 -0.1 1,908,796 + Dshi_1828 0.78 -0.4 1,909,228 + -0.9 1,909,255 + -0.2 1,909,346 + +0.4 1,909,349 - Dshi_1829 0.10 -1.1 1,909,381 + Dshi_1829 0.12 +0.8 1,909,451 + Dshi_1829 0.17 -0.2 1,909,467 - Dshi_1829 0.19 -0.2 1,909,499 - Dshi_1829 0.21 -0.0 1,909,634 - Dshi_1829 0.31 -0.1 1,909,664 + Dshi_1829 0.33 -0.3 1,909,808 - Dshi_1829 0.43 +0.0 1,909,833 + Dshi_1829 0.45 -0.3 1,909,963 + Dshi_1829 0.54 -0.2 1,909,980 + Dshi_1829 0.55 +0.9 1,910,073 + Dshi_1829 0.62 +0.5 1,910,083 - Dshi_1829 0.63 -0.5 1,910,085 + Dshi_1829 0.63 +0.1 1,910,104 - Dshi_1829 0.64 -0.3 1,910,130 + Dshi_1829 0.66 +0.0 1,910,130 + Dshi_1829 0.66 +0.4
Or see this region's nucleotide sequence