Experiment: MoLS4 with L-Glutamate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0456 and DVU0457 are separated by 155 nucleotides DVU0457 and DORF5389 are separated by 245 nucleotides DORF5389 and DVU0458 are separated by 378 nucleotides DVU0458 and DVU0459 are separated by 41 nucleotides
DVU0456: DVU0456 - DHH family protein (TIGR), at 523,950 to 524,957
DVU0456
DVU0457: DVU0457 - EAL domain protein (TIGR), at 525,113 to 526,363
DVU0457
DORF5389: DORF5389 - no description, at 526,609 to 526,767
DORF5389
DVU0458: DVU0458 - hypothetical protein (TIGR), at 527,146 to 527,313
DVU0458
DVU0459: DVU0459 - hypothetical protein (TIGR), at 527,355 to 527,456
DVU0459
Position (kb) 525
526
527 Strain fitness (log2 ratio) -2
-1
0
1 at 524.191 kb on - strand, within DVU0456 at 524.191 kb on - strand, within DVU0456 at 524.215 kb on + strand, within DVU0456 at 524.241 kb on + strand, within DVU0456 at 524.270 kb on - strand, within DVU0456 at 524.312 kb on - strand, within DVU0456 at 524.396 kb on + strand, within DVU0456 at 524.404 kb on - strand, within DVU0456 at 524.425 kb on - strand, within DVU0456 at 524.539 kb on - strand, within DVU0456 at 524.555 kb on + strand, within DVU0456 at 524.564 kb on + strand, within DVU0456 at 524.564 kb on + strand, within DVU0456 at 524.572 kb on - strand, within DVU0456 at 524.572 kb on - strand, within DVU0456 at 524.622 kb on - strand, within DVU0456 at 524.836 kb on - strand, within DVU0456 at 524.843 kb on - strand, within DVU0456 at 524.884 kb on - strand at 524.951 kb on + strand at 524.951 kb on + strand at 524.990 kb on - strand at 525.079 kb on + strand at 525.079 kb on + strand at 525.171 kb on - strand at 525.196 kb on - strand at 525.324 kb on + strand, within DVU0457 at 525.327 kb on + strand, within DVU0457 at 525.490 kb on + strand, within DVU0457 at 525.570 kb on + strand, within DVU0457 at 525.571 kb on - strand, within DVU0457 at 525.586 kb on - strand, within DVU0457 at 525.640 kb on - strand, within DVU0457 at 525.661 kb on - strand, within DVU0457 at 525.661 kb on - strand, within DVU0457 at 525.997 kb on - strand, within DVU0457 at 526.030 kb on + strand, within DVU0457 at 526.223 kb on - strand, within DVU0457 at 526.274 kb on - strand at 526.432 kb on - strand at 526.449 kb on + strand at 526.457 kb on - strand at 526.490 kb on - strand at 526.503 kb on + strand at 526.508 kb on + strand at 526.527 kb on + strand at 526.574 kb on - strand at 526.617 kb on - strand at 526.637 kb on + strand, within DORF5389 at 526.637 kb on + strand, within DORF5389 at 526.645 kb on - strand, within DORF5389 at 526.645 kb on - strand, within DORF5389 at 526.659 kb on + strand, within DORF5389 at 526.667 kb on - strand, within DORF5389 at 526.708 kb on - strand, within DORF5389 at 526.748 kb on - strand, within DORF5389 at 526.817 kb on + strand at 526.823 kb on - strand at 526.825 kb on - strand at 526.842 kb on - strand at 526.884 kb on + strand at 527.013 kb on - strand at 527.016 kb on + strand at 527.024 kb on - strand at 527.031 kb on + strand at 527.069 kb on + strand at 527.363 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamate (N) remove 524,191 - DVU0456 0.24 -0.8 524,191 - DVU0456 0.24 -0.9 524,215 + DVU0456 0.26 -0.4 524,241 + DVU0456 0.29 -0.2 524,270 - DVU0456 0.32 -0.1 524,312 - DVU0456 0.36 -0.9 524,396 + DVU0456 0.44 -0.1 524,404 - DVU0456 0.45 -0.3 524,425 - DVU0456 0.47 -0.0 524,539 - DVU0456 0.58 +0.3 524,555 + DVU0456 0.60 -0.1 524,564 + DVU0456 0.61 +0.3 524,564 + DVU0456 0.61 -0.5 524,572 - DVU0456 0.62 +0.9 524,572 - DVU0456 0.62 -1.6 524,622 - DVU0456 0.67 +0.4 524,836 - DVU0456 0.88 +0.3 524,843 - DVU0456 0.89 -0.1 524,884 - -0.2 524,951 + +0.0 524,951 + -0.5 524,990 - -0.3 525,079 + -0.5 525,079 + +0.4 525,171 - -0.6 525,196 - -1.0 525,324 + DVU0457 0.17 -0.7 525,327 + DVU0457 0.17 -2.0 525,490 + DVU0457 0.30 -1.1 525,570 + DVU0457 0.37 -0.8 525,571 - DVU0457 0.37 -0.3 525,586 - DVU0457 0.38 -1.4 525,640 - DVU0457 0.42 -0.6 525,661 - DVU0457 0.44 -0.6 525,661 - DVU0457 0.44 -0.4 525,997 - DVU0457 0.71 -0.9 526,030 + DVU0457 0.73 -1.0 526,223 - DVU0457 0.89 -0.8 526,274 - -0.3 526,432 - -0.2 526,449 + -0.5 526,457 - -1.9 526,490 - -0.5 526,503 + -0.3 526,508 + -0.3 526,527 + -0.2 526,574 - -0.3 526,617 - -0.2 526,637 + DORF5389 0.18 -0.2 526,637 + DORF5389 0.18 -0.4 526,645 - DORF5389 0.23 +0.6 526,645 - DORF5389 0.23 -0.1 526,659 + DORF5389 0.31 -0.5 526,667 - DORF5389 0.36 -0.1 526,708 - DORF5389 0.62 -0.2 526,748 - DORF5389 0.87 -0.0 526,817 + -0.9 526,823 - +0.9 526,825 - -0.2 526,842 - -0.4 526,884 + -0.7 527,013 - -0.5 527,016 + -0.5 527,024 - -0.8 527,031 + -0.6 527,069 + -0.5 527,363 + -1.7
Or see this region's nucleotide sequence