Experiment: MoLS4 with L-Glutamate (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt rsbV and DVU1996 are separated by 598 nucleotides DVU1996 and DORF14879 are separated by 1 nucleotides DORF14879 and DVU1999 are separated by 500 nucleotides
DVU1995: rsbV - anti-anti-sigma factor (TIGR), at 2,076,256 to 2,076,585
rsbV
DVU1996: DVU1996 - quaternary ammonium compound-resistance protein QacC, putative (TIGR), at 2,077,184 to 2,077,513
DVU1996
DORF14879: DORF14879 - no description, at 2,077,515 to 2,079,059
DORF14879
DVU1999: DVU1999 - sulfate transporter family protein (TIGR), at 2,079,560 to 2,081,704
DVU1999
Position (kb)
2077
2078
2079
2080 Strain fitness (log2 ratio)
-2
-1
0
1 at 2076.585 kb on + strand at 2076.603 kb on - strand at 2076.619 kb on + strand at 2076.629 kb on - strand at 2076.645 kb on - strand at 2076.670 kb on - strand at 2076.813 kb on + strand at 2076.857 kb on - strand at 2076.857 kb on - strand at 2076.902 kb on - strand at 2076.902 kb on - strand at 2076.960 kb on + strand at 2077.062 kb on - strand at 2077.083 kb on - strand at 2077.244 kb on + strand, within DVU1996 at 2077.379 kb on + strand, within DVU1996 at 2077.470 kb on + strand, within DVU1996 at 2077.479 kb on - strand, within DVU1996 at 2077.874 kb on + strand, within DORF14879 at 2078.046 kb on - strand, within DORF14879 at 2078.293 kb on + strand, within DORF14879 at 2078.734 kb on - strand, within DORF14879 at 2079.263 kb on + strand at 2079.287 kb on - strand at 2079.296 kb on + strand at 2079.299 kb on - strand at 2079.419 kb on + strand at 2079.419 kb on + strand at 2079.582 kb on + strand at 2079.637 kb on - strand at 2079.677 kb on + strand at 2079.677 kb on + strand at 2079.680 kb on - strand at 2079.680 kb on - strand at 2079.680 kb on - strand at 2079.763 kb on - strand at 2079.776 kb on + strand, within DVU1999 at 2079.834 kb on - strand, within DVU1999 at 2079.910 kb on + strand, within DVU1999 at 2080.022 kb on - strand, within DVU1999
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Glutamate (N) remove 2,076,585 + -0.1 2,076,603 - -0.7 2,076,619 + +0.5 2,076,629 - +0.1 2,076,645 - -0.7 2,076,670 - +0.5 2,076,813 + -0.1 2,076,857 - +0.2 2,076,857 - -0.5 2,076,902 - -0.0 2,076,902 - -0.4 2,076,960 + +1.2 2,077,062 - -0.3 2,077,083 - -1.6 2,077,244 + DVU1996 0.18 +0.4 2,077,379 + DVU1996 0.59 -1.7 2,077,470 + DVU1996 0.87 -0.2 2,077,479 - DVU1996 0.89 +0.6 2,077,874 + DORF14879 0.23 -0.4 2,078,046 - DORF14879 0.34 -0.0 2,078,293 + DORF14879 0.50 -0.1 2,078,734 - DORF14879 0.79 +0.1 2,079,263 + +0.1 2,079,287 - -0.2 2,079,296 + -0.9 2,079,299 - +0.2 2,079,419 + -0.8 2,079,419 + -0.8 2,079,582 + -0.0 2,079,637 - +1.1 2,079,677 + -0.0 2,079,677 + -1.1 2,079,680 - -0.3 2,079,680 - -2.2 2,079,680 - -0.4 2,079,763 - +0.7 2,079,776 + DVU1999 0.10 -0.4 2,079,834 - DVU1999 0.13 -0.1 2,079,910 + DVU1999 0.16 +0.3 2,080,022 - DVU1999 0.22 +0.0
Or see this region's nucleotide sequence