Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3157

Experiment: KB with Rotenone 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.25 mg/ml
3,782,037	+		Psyr_3156	0.27	-1.1
3,782,038	-		Psyr_3156	0.27	-0.4
3,782,054	+		Psyr_3156	0.29	+1.0
3,782,054	+		Psyr_3156	0.29	-0.2
3,782,054	+		Psyr_3156	0.29	-0.9
3,782,055	-		Psyr_3156	0.29	+0.1
3,782,055	-		Psyr_3156	0.29	+0.7
3,782,055	-		Psyr_3156	0.29	-0.3
3,782,068	-		Psyr_3156	0.30	+1.4
3,782,338	-		Psyr_3156	0.58	-0.1
3,782,338	-		Psyr_3156	0.58	-0.8
3,782,572	+		Psyr_3156	0.82	-0.5
3,782,573	-		Psyr_3156	0.82	-0.6
3,782,731	+				-0.4
3,782,731	+				-0.2
3,782,731	+				+0.2
3,782,732	-				+1.9
3,782,787	+				+2.8
3,782,787	+				+0.2
3,782,787	+				+0.7
3,782,787	+				+0.5
3,782,788	-				+0.2
3,782,788	-				+0.1
3,782,788	-				-0.0
3,782,788	-				+1.2
3,782,789	+				-0.0
3,782,789	+				+0.8
3,782,789	+				-0.9
3,782,789	+				+0.8
3,782,790	-				+0.1
3,782,790	-				-0.1
3,782,790	-				+0.8
3,782,790	-				+1.1
3,782,818	+				-0.2
3,782,818	+				+0.1
3,782,818	+				-2.1
3,782,818	+				+1.8
3,782,818	+				-0.3
3,782,819	-				-1.8
3,782,819	-				+2.6
3,782,819	-				-0.2
3,782,819	-				+1.1
3,782,903	+				+0.1
3,782,928	+				+1.4
3,782,929	-				-0.6
3,783,008	-				-0.7
3,783,017	+				-0.2
3,783,017	+				+0.8
3,783,018	-				-1.6
3,783,115	-				-0.8
3,783,115	-				+0.0
3,783,524	+		Psyr_3157	0.32	+0.1
3,783,632	+		Psyr_3157	0.39	+1.2
3,783,794	-		Psyr_3157	0.49	+0.8
3,784,038	+		Psyr_3157	0.65	-0.3
3,784,039	-		Psyr_3157	0.65	+1.6
3,784,129	+		Psyr_3157	0.71	-0.4
3,784,130	-		Psyr_3157	0.71	+0.9
3,784,130	-		Psyr_3157	0.71	-0.8
3,784,130	-		Psyr_3157	0.71	-0.6
3,784,130	-		Psyr_3157	0.71	+1.5
3,784,308	+		Psyr_3157	0.82	+0.3
3,784,308	+		Psyr_3157	0.82	+0.5
3,784,308	+		Psyr_3157	0.82	+0.9
3,784,308	+		Psyr_3157	0.82	+0.4
3,784,308	+		Psyr_3157	0.82	+0.0
3,784,308	+		Psyr_3157	0.82	+2.1
3,784,309	-		Psyr_3157	0.82	+2.8
3,784,309	-		Psyr_3157	0.82	+0.9
3,784,309	-		Psyr_3157	0.82	-1.3
3,784,689	+				-1.2
3,784,689	+				-0.3
3,784,727	-				-0.4
3,784,727	-				-1.0
3,784,727	-				+1.6
3,784,752	+				+0.3
3,784,752	+				+0.0
3,784,771	+				+0.2
3,784,772	-				-0.8
3,784,772	-				-0.7
3,784,802	+				-0.3
3,784,814	+				-1.3
3,784,814	+				+1.2
3,784,815	-				-0.7
3,784,858	-				+0.6
3,784,950	+				-0.2
3,784,950	+				-0.5
3,784,950	+				-0.3
3,784,950	+				+0.2
3,784,951	-				+0.5
3,784,956	+				-0.1
3,784,957	-				+0.8
3,784,957	-				+2.2
3,785,039	-				-0.5
3,785,049	+				-1.0
3,785,207	+		Psyr_3158	0.16	+1.6
3,785,319	-		Psyr_3158	0.25	-1.4
3,785,395	-		Psyr_3158	0.32	-0.5
3,785,512	-		Psyr_3158	0.41	-0.5
3,785,574	+		Psyr_3158	0.47	-0.3
3,785,574	+		Psyr_3158	0.47	-0.8
3,785,575	-		Psyr_3158	0.47	-0.0
3,785,575	-		Psyr_3158	0.47	+2.2