Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2716

Experiment: KB with Rotenone 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.25 mg/ml
3,297,445	+		Psyr_2715	0.30	+2.0
3,297,445	+		Psyr_2715	0.30	+0.2
3,297,445	+		Psyr_2715	0.30	-1.6
3,297,445	+		Psyr_2715	0.30	-0.3
3,297,446	-		Psyr_2715	0.30	+0.1
3,297,446	-		Psyr_2715	0.30	-1.4
3,297,446	-		Psyr_2715	0.30	+2.7
3,297,446	-		Psyr_2715	0.30	-1.2
3,297,448	+		Psyr_2715	0.30	+0.4
3,297,448	+		Psyr_2715	0.30	+2.2
3,297,448	+		Psyr_2715	0.30	-0.7
3,297,448	+		Psyr_2715	0.30	+0.3
3,297,448	+		Psyr_2715	0.30	-0.0
3,297,448	+		Psyr_2715	0.30	-0.1
3,297,448	+		Psyr_2715	0.30	-0.5
3,297,448	+		Psyr_2715	0.30	-0.8
3,297,449	-		Psyr_2715	0.30	-0.9
3,297,449	-		Psyr_2715	0.30	+2.0
3,297,449	-		Psyr_2715	0.30	-0.8
3,297,449	-		Psyr_2715	0.30	+1.6
3,297,449	-		Psyr_2715	0.30	+0.2
3,297,449	-		Psyr_2715	0.30	+0.8
3,297,449	-		Psyr_2715	0.30	-0.3
3,297,818	-		Psyr_2715	0.57	-0.4
3,297,841	+		Psyr_2715	0.58	-1.0
3,297,841	+		Psyr_2715	0.58	+1.0
3,297,841	+		Psyr_2715	0.58	-0.8
3,297,842	-		Psyr_2715	0.58	-0.4
3,297,842	-		Psyr_2715	0.58	+0.4
3,297,842	-		Psyr_2715	0.58	-0.2
3,297,842	-				+1.4
3,297,842	-		Psyr_2715	0.58	-0.8
3,297,842	-		Psyr_2715	0.58	+1.3
3,297,842	-		Psyr_2715	0.58	+1.9
3,297,842	-		Psyr_2715	0.58	-1.1
3,297,842	-		Psyr_2715	0.58	+0.0
3,297,842	-		Psyr_2715	0.58	-0.6
3,297,952	+		Psyr_2715	0.66	-1.0
3,297,952	+		Psyr_2715	0.66	+0.4
3,297,952	+		Psyr_2715	0.66	-2.0
3,297,953	-		Psyr_2715	0.66	-0.6
3,297,953	-		Psyr_2715	0.66	+0.7
3,297,953	-		Psyr_2715	0.66	-0.7
3,298,565	-				+0.2
3,298,585	+		Psyr_2716	0.11	+0.1
3,298,585	+		Psyr_2716	0.11	+0.3
3,298,586	-		Psyr_2716	0.11	-1.6
3,298,586	-		Psyr_2716	0.11	+0.1
3,298,586	-		Psyr_2716	0.11	+1.4
3,298,701	+		Psyr_2716	0.20	+0.3
3,298,701	+		Psyr_2716	0.20	-0.9
3,298,702	-		Psyr_2716	0.20	-0.1
3,298,772	-		Psyr_2716	0.26	-0.2
3,298,772	-		Psyr_2716	0.26	-0.2
3,298,772	-		Psyr_2716	0.26	-1.7
3,298,788	-		Psyr_2716	0.27	-0.3
3,298,865	+		Psyr_2716	0.33	+0.1
3,298,865	+		Psyr_2716	0.33	-0.6
3,298,879	+		Psyr_2716	0.34	-0.2
3,298,879	+		Psyr_2716	0.34	+0.2
3,298,894	+		Psyr_2716	0.36	-1.3
3,298,895	-		Psyr_2716	0.36	-0.9
3,298,895	-		Psyr_2716	0.36	-1.3
3,298,993	+		Psyr_2716	0.43	-2.2
3,299,170	+		Psyr_2716	0.57	-0.6
3,299,170	+		Psyr_2716	0.57	-1.8
3,299,171	-		Psyr_2716	0.57	-0.0
3,299,174	-		Psyr_2716	0.57	-2.2
3,299,326	+		Psyr_2716	0.69	+0.6
3,299,470	+		Psyr_2716	0.81	-1.9
3,299,471	-		Psyr_2716	0.81	-0.5
3,299,596	+				-0.3
3,299,626	+				+0.7
3,299,677	+				+0.0
3,299,678	-				+1.4
3,299,711	-				-0.7
3,299,711	-				+0.7
3,299,940	+				-1.2
3,300,055	+		Psyr_2717	0.45	+2.4
3,300,056	-		Psyr_2717	0.45	-2.0
3,300,056	-		Psyr_2717	0.45	+1.1
3,300,056	-		Psyr_2717	0.45	-0.6
3,300,056	-		Psyr_2717	0.45	-0.4
3,300,056	-		Psyr_2717	0.45	-1.7
3,300,095	-		Psyr_2717	0.58	+2.4
3,300,259	+				+0.1
3,300,259	+				-1.8
3,300,369	+				+1.0
3,300,369	+				+0.3
3,300,369	+				+0.1
3,300,370	-		Psyr_2718	0.10	-1.1
3,300,370	-		Psyr_2718	0.10	-1.0
3,300,370	-		Psyr_2718	0.10	+0.4
3,300,370	-		Psyr_2718	0.10	-1.6
3,300,370	-		Psyr_2718	0.10	+0.5
3,300,375	+		Psyr_2718	0.10	+0.6
3,300,475	+		Psyr_2718	0.19	+0.4
3,300,475	+		Psyr_2718	0.19	-0.6
3,300,475	+		Psyr_2718	0.19	-0.1
3,300,476	-		Psyr_2718	0.19	-0.1
3,300,476	-		Psyr_2718	0.19	-0.4
3,300,484	-		Psyr_2718	0.20	-2.8
3,300,495	+		Psyr_2718	0.21	-0.5
3,300,495	+		Psyr_2718	0.21	+0.5
3,300,622	-		Psyr_2718	0.31	-0.5
3,300,651	+		Psyr_2718	0.34	-0.7
3,300,651	+		Psyr_2718	0.34	-0.5
3,300,652	-		Psyr_2718	0.34	-1.3