Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_1202

Experiment: KB with Rotenone 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Rotenone 0.25 mg/ml
1,359,221	+		Psyr_1200	0.68	+0.3
1,359,313	+		Psyr_1200	0.73	-0.2
1,359,314	-		Psyr_1200	0.73	+0.8
1,359,314	-		Psyr_1200	0.73	+0.2
1,359,421	+		Psyr_1200	0.78	+0.9
1,359,421	+		Psyr_1200	0.78	+0.8
1,359,421	+		Psyr_1200	0.78	-0.2
1,359,421	+		Psyr_1200	0.78	+1.6
1,359,422	-		Psyr_1200	0.78	+0.5
1,359,652	+		Psyr_1200	0.89	-0.9
1,359,652	+		Psyr_1200	0.89	-0.2
1,359,653	-		Psyr_1200	0.89	+0.5
1,359,653	-		Psyr_1200	0.89	-0.9
1,359,653	-		Psyr_1200	0.89	-0.3
1,359,653	-		Psyr_1200	0.89	+0.9
1,359,653	-		Psyr_1200	0.89	-0.4
1,359,653	-		Psyr_1200	0.89	-0.4
1,359,808	+				-0.9
1,359,808	+				-0.6
1,359,808	+				+0.9
1,359,808	+				-0.4
1,359,808	+				+0.1
1,359,808	+				-0.3
1,359,808	+				+1.9
1,359,808	+				-0.1
1,359,808	+				+0.1
1,359,808	+				-0.6
1,359,808	+				+0.3
1,359,808	+				+0.3
1,359,809	-				+1.3
1,359,809	-				-0.4
1,359,809	-				+0.6
1,359,809	-				-2.2
1,359,809	-				+0.2
1,359,809	-				+0.2
1,359,818	+				-0.0
1,359,819	-				+0.8
1,359,819	-				-1.8
1,360,062	+		Psyr_1201	0.87	-0.5
1,360,078	+				-0.5
1,360,086	+				-1.2
1,360,086	+				+0.1
1,360,087	-				+0.3
1,360,121	+				+0.9
1,360,122	-				-0.9
1,360,122	-				-0.1
1,360,122	-				-1.0
1,360,124	+				+0.6
1,360,124	+				+0.6
1,360,124	+				-0.0
1,360,124	+				-0.4
1,360,125	-				-2.2
1,360,125	-				+0.1
1,360,304	+		Psyr_1202	0.61	-0.3
1,360,305	-		Psyr_1202	0.61	-0.1
1,360,305	-		Psyr_1202	0.61	-2.4
1,360,411	-				+0.4
1,360,444	-				+1.0
1,360,535	+				-0.1
1,360,564	+				+1.2
1,360,565	-				+1.0
1,360,574	+				-0.6
1,360,574	+				-1.0
1,360,575	-				+0.8
1,360,578	-				-0.7
1,360,625	-				+0.1
1,360,625	-				-1.0
1,360,625	-				+0.1
1,360,626	+				-0.6
1,360,626	+				-0.0
1,360,626	+				+1.7
1,360,627	-				-0.1
1,360,627	-				+0.2
1,360,627	-				+0.4
1,360,630	+				+0.3
1,360,630	+				-1.6
1,360,630	+				-0.5
1,360,631	-				+0.6
1,360,631	-				-0.2
1,360,631	-				-2.0
1,360,631	-				-0.2
1,360,631	-				-0.7
1,360,631	-				-3.6
1,360,700	+				+1.0
1,360,700	+				-0.8
1,360,701	-				+0.4
1,360,701	-				+2.6
1,360,709	+				-0.1
1,360,710	-				+1.0
1,360,710	-				+0.6
1,360,710	-				+2.2
1,360,710	-				+0.0
1,360,790	+				+0.9
1,360,791	-				+1.8
1,360,800	-				+0.9
1,360,836	+				-0.5
1,360,836	+				-0.2
1,360,837	-				-0.3
1,360,837	-				+2.6
1,360,881	+				-0.1
1,360,882	-				+1.2
1,360,922	+				-0.1
1,360,926	-				-0.6
1,360,939	+				+0.2
1,360,939	+				-0.2
1,360,939	+				+0.9
1,360,939	+				-0.4
1,360,939	+				+1.6
1,360,939	+				-0.0
1,360,940	-				-2.0
1,360,940	-				-0.7
1,360,940	-				-0.4
1,360,940	-				-1.8
1,360,940	-				-0.7
1,360,948	+				+1.3
1,360,949	-				+1.3
1,360,992	+				+0.4
1,360,993	-				+0.6
1,360,998	-				+0.2
1,360,998	-				-0.8
1,361,042	+				+1.3
1,361,043	-				-1.9
1,361,043	-				-0.4
1,361,047	-				+0.1
1,361,138	+		Psyr_1203	0.11	+1.6
1,361,138	+		Psyr_1203	0.11	+0.0
1,361,139	-		Psyr_1203	0.11	+1.3
1,361,139	-		Psyr_1203	0.11	-0.6
1,361,139	-		Psyr_1203	0.11	+0.1
1,361,157	+		Psyr_1203	0.13	-1.2
1,361,158	-		Psyr_1203	0.14	+1.6
1,361,158	-		Psyr_1203	0.14	+0.3
1,361,160	+		Psyr_1203	0.14	+0.6
1,361,270	+		Psyr_1203	0.27	-1.3
1,361,270	+		Psyr_1203	0.27	-1.2
1,361,317	+		Psyr_1203	0.32	+0.1
1,361,317	+		Psyr_1203	0.32	-0.6
1,361,318	-		Psyr_1203	0.32	+0.7
1,361,341	-		Psyr_1203	0.35	-0.7
1,361,355	+		Psyr_1203	0.36	-0.7
1,361,355	+		Psyr_1203	0.36	+0.6
1,361,409	+		Psyr_1203	0.43	+0.5
1,361,438	+		Psyr_1203	0.46	-0.0
1,361,438	+		Psyr_1203	0.46	-1.4
1,361,438	+		Psyr_1203	0.46	-1.5
1,361,438	+		Psyr_1203	0.46	+0.0
1,361,438	+		Psyr_1203	0.46	-0.9