Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05590

Experiment: Growth with Chloride 200 mM; with MOPS

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Growth with Chloride 200 mM; with MOPS
1,259,380	+				-0.4
1,259,380	+				-1.9
1,259,381	-				+0.4
1,259,381	-				+0.5
1,259,381	-				-3.3
1,259,437	+				-0.2
1,259,437	+				+1.4
1,259,437	+				+0.8
1,259,437	+				-0.7
1,259,437	+				+0.8
1,259,437	+				+0.7
1,259,438	-				+0.6
1,259,438	-				+1.5
1,259,438	-				-1.5
1,259,438	-				-2.1
1,259,438	-				-2.9
1,259,492	+				-2.0
1,259,492	+				-1.0
1,259,492	+				-0.9
1,259,501	-				-1.2
1,259,512	-				-1.1
1,259,518	+				+0.4
1,259,635	+				-0.3
1,259,635	+				-1.2
1,259,635	+				+0.4
1,259,635	+				+0.8
1,259,636	-				+1.4
1,259,636	-				-3.0
1,259,636	-				-1.2
1,259,636	-				-0.4
1,259,636	-				+1.7
1,259,659	-				+1.2
1,259,659	-				-2.1
1,259,659	-				-0.9
1,259,659	-				+1.6
1,259,842	+		PFLU_RS05585	0.28	-1.7
1,259,971	+		PFLU_RS05585	0.46	-1.0
1,259,971	+		PFLU_RS05585	0.46	-0.4
1,259,971	+		PFLU_RS05585	0.46	+1.6
1,259,971	+		PFLU_RS05585	0.46	-0.4
1,259,971	+		PFLU_RS05585	0.46	+1.0
1,259,971	+		PFLU_RS05585	0.46	-2.1
1,259,971	+		PFLU_RS05585	0.46	+2.2
1,259,971	+		PFLU_RS05585	0.46	-1.0
1,259,971	+		PFLU_RS05585	0.46	-1.6
1,259,972	-		PFLU_RS05585	0.47	-0.0
1,259,972	-		PFLU_RS05585	0.47	-1.1
1,259,972	-		PFLU_RS05585	0.47	-2.3
1,259,972	-		PFLU_RS05585	0.47	-1.7
1,259,972	-		PFLU_RS05585	0.47	-2.6
1,259,972	-		PFLU_RS05585	0.47	-1.3
1,259,972	-		PFLU_RS05585	0.47	+2.9
1,259,972	-		PFLU_RS05585	0.47	-2.2
1,259,972	-		PFLU_RS05585	0.47	-0.9
1,259,972	-		PFLU_RS05585	0.47	+1.7
1,259,972	-		PFLU_RS05585	0.47	-0.1
1,259,972	-		PFLU_RS05585	0.47	+1.2
1,260,199	+		PFLU_RS05585	0.79	-1.0
1,260,200	-		PFLU_RS05585	0.79	-0.2
1,260,401	+				+1.3
1,260,401	+				-0.4
1,260,401	+				+1.2
1,260,401	+				+0.6
1,260,402	-				-1.2
1,260,402	-				-0.3
1,260,402	-				-0.4
1,260,402	-				-0.0
1,260,428	+				-1.0
1,260,428	+				+1.3
1,260,428	+				+0.7
1,260,428	+				-0.0
1,260,429	-				-2.7
1,260,429	-				-1.6
1,260,445	+				-1.8
1,260,446	-				+0.3
1,260,446	-				+0.6
1,260,446	-				-0.4
1,260,446	-				-2.3
1,260,446	-				-0.1
1,260,470	+				-1.2
1,260,470	+				-1.9
1,260,470	+				-0.0
1,260,470	+				+0.3
1,260,470	+				-1.1
1,260,470	+				+0.3
1,260,470	+				-1.0
1,260,471	-				-0.3
1,260,471	-				-0.7
1,260,471	-				-3.3
1,260,471	-				+0.1
1,260,471	-				+0.5
1,260,471	-				-1.0
1,260,471	-				-1.9
1,260,471	-				-2.8
1,260,471	-				-1.0
1,260,471	-				-1.7
1,260,471	-				+0.8
1,260,471	-				+2.6
1,260,471	-				-0.9
1,260,471	-				-3.2
1,260,474	+				+0.3
1,260,474	+				-0.9
1,260,474	+				+0.5
1,260,474	+				-0.2
1,260,475	-				+0.3
1,260,475	-				-1.0
1,260,475	-				+0.6
1,260,475	-				-1.5
1,260,475	-				-0.7
1,260,498	-		PFLU_RS05590	0.11	-2.7
1,260,498	-		PFLU_RS05590	0.11	-2.0
1,260,608	+		PFLU_RS05590	0.19	-0.9
1,260,608	+		PFLU_RS05590	0.19	+1.1
1,260,608	+		PFLU_RS05590	0.19	+1.8
1,260,800	-		PFLU_RS05590	0.33	-2.0
1,260,929	+		PFLU_RS05590	0.42	-0.5
1,260,929	+		PFLU_RS05590	0.42	-2.7
1,260,930	-		PFLU_RS05590	0.42	+0.5
1,260,930	-		PFLU_RS05590	0.42	-2.3
1,260,930	-		PFLU_RS05590	0.42	-0.8
1,260,977	+		PFLU_RS05590	0.46	-0.5
1,260,977	+		PFLU_RS05590	0.46	-2.8
1,260,977	+		PFLU_RS05590	0.46	+0.4
1,260,977	+		PFLU_RS05590	0.46	-1.4
1,260,977	+		PFLU_RS05590	0.46	-1.4
1,260,977	+		PFLU_RS05590	0.46	-2.6
1,260,977	+		PFLU_RS05590	0.46	-2.4
1,260,977	+		PFLU_RS05590	0.46	+1.0
1,261,017	-		PFLU_RS05590	0.48	-0.2
1,261,017	-		PFLU_RS05590	0.48	-0.1
1,261,028	+		PFLU_RS05590	0.49	-0.5
1,261,059	-		PFLU_RS05590	0.51	-0.4
1,261,154	+		PFLU_RS05590	0.58	+1.2
1,261,547	+		PFLU_RS05590	0.86	-0.7
1,261,547	+		PFLU_RS05590	0.86	+2.1
1,261,547	+		PFLU_RS05590	0.86	-1.6
1,261,547	+		PFLU_RS05590	0.86	-0.0
1,261,547	+		PFLU_RS05590	0.86	+1.6
1,261,547	+		PFLU_RS05590	0.86	-1.0
1,261,547	+		PFLU_RS05590	0.86	-2.7
1,261,547	+		PFLU_RS05590	0.86	-0.2
1,261,547	+		PFLU_RS05590	0.86	-0.4
1,261,547	+		PFLU_RS05590	0.86	-2.6
1,261,547	+		PFLU_RS05590	0.86	-0.7
1,261,547	+		PFLU_RS05590	0.86	-0.7
1,261,547	+		PFLU_RS05590	0.86	-0.7
1,261,547	+		PFLU_RS05590	0.86	-0.7
1,261,547	+		PFLU_RS05590	0.86	+0.4
1,261,548	-		PFLU_RS05590	0.87	-2.0
1,261,548	-		PFLU_RS05590	0.87	-0.4
1,261,548	-		PFLU_RS05590	0.87	-2.3
1,261,548	-		PFLU_RS05590	0.87	-0.9
1,261,548	-		PFLU_RS05590	0.87	-0.5
1,261,548	-		PFLU_RS05590	0.87	-2.5
1,261,548	-		PFLU_RS05590	0.87	+0.6
1,261,581	+		PFLU_RS05590	0.89	-0.6
1,261,581	+		PFLU_RS05590	0.89	-0.7
1,261,581	+		PFLU_RS05590	0.89	-0.2
1,261,581	+		PFLU_RS05590	0.89	-0.2
1,261,582	-		PFLU_RS05590	0.89	-0.9
1,261,626	-				+0.3
1,261,626	-				+1.9
1,261,628	+				-1.2
1,261,628	+				-1.6
1,261,628	+				+0.8
1,261,628	+				+1.3
1,261,628	+				-0.7
1,261,628	+				-1.9
1,261,628	+				-1.7
1,261,629	-				-1.3
1,261,629	-				+0.7
1,261,629	-				-1.7
1,261,629	-				+0.1
1,261,629	-				-1.6
1,261,888	+		PFLU_RS05595	0.17	+0.1
1,261,888	+		PFLU_RS05595	0.17	-1.4
1,261,888	+		PFLU_RS05595	0.17	+1.6
1,261,888	+		PFLU_RS05595	0.17	-0.5
1,261,888	+		PFLU_RS05595	0.17	+2.4
1,261,888	+		PFLU_RS05595	0.17	+0.4
1,261,888	+		PFLU_RS05595	0.17	+1.0
1,261,888	+		PFLU_RS05595	0.17	-0.3
1,261,888	+		PFLU_RS05595	0.17	-1.0
1,261,888	+		PFLU_RS05595	0.17	+0.9
1,261,889	-		PFLU_RS05595	0.17	+0.4
1,261,889	-		PFLU_RS05595	0.17	+0.5
1,261,889	-		PFLU_RS05595	0.17	+0.9
1,261,889	-		PFLU_RS05595	0.17	-1.4
1,261,889	-		PFLU_RS05595	0.17	+1.2
1,261,889	-		PFLU_RS05595	0.17	+1.6
1,261,889	-		PFLU_RS05595	0.17	-0.0
1,261,889	-		PFLU_RS05595	0.17	-1.7
1,261,889	-		PFLU_RS05595	0.17	+0.7
1,261,889	-		PFLU_RS05595	0.17	-1.7
1,261,896	+		PFLU_RS05595	0.18	+0.3
1,261,957	+		PFLU_RS05595	0.25	-0.1
1,262,050	+		PFLU_RS05595	0.35	-0.4
1,262,051	-		PFLU_RS05595	0.35	+0.8
1,262,051	-		PFLU_RS05595	0.35	-1.6
1,262,051	-		PFLU_RS05595	0.35	+1.0
1,262,051	-		PFLU_RS05595	0.35	-1.2
1,262,095	+		PFLU_RS05595	0.40	+2.3
1,262,095	+		PFLU_RS05595	0.40	+1.3
1,262,096	-		PFLU_RS05595	0.40	-0.5
1,262,096	-		PFLU_RS05595	0.40	-3.1
1,262,096	-		PFLU_RS05595	0.40	-2.2
1,262,096	-		PFLU_RS05595	0.40	+0.5
1,262,096	-		PFLU_RS05595	0.40	+2.3
1,262,096	-		PFLU_RS05595	0.40	-2.5
1,262,096	-		PFLU_RS05595	0.40	-1.9
1,262,113	+		PFLU_RS05595	0.42	-0.9
1,262,113	+		PFLU_RS05595	0.42	-0.9
1,262,113	+		PFLU_RS05595	0.42	-1.1
1,262,113	+		PFLU_RS05595	0.42	+2.6
1,262,113	+		PFLU_RS05595	0.42	+0.8
1,262,114	-		PFLU_RS05595	0.42	+0.4
1,262,114	-		PFLU_RS05595	0.42	-1.0
1,262,114	-		PFLU_RS05595	0.42	-1.1
1,262,212	+		PFLU_RS05595	0.53	-0.1
1,262,369	+		PFLU_RS05595	0.71	-1.8
1,262,370	-		PFLU_RS05595	0.71	-0.4
1,262,428	+		PFLU_RS05595	0.77	-0.0
1,262,429	-		PFLU_RS05595	0.77	+0.3
1,262,483	-		PFLU_RS05595	0.83	-0.9
1,262,528	+		PFLU_RS05595	0.88	-0.0
1,262,528	+		PFLU_RS05595	0.88	-2.9
1,262,529	-		PFLU_RS05595	0.89	-2.4
1,262,559	-				+0.5
1,262,559	-				-0.6
1,262,559	-				-2.3
1,262,559	-				+1.2
1,262,559	-				+1.5
1,262,559	-				-0.5
1,262,559	-				-0.5
1,262,563	-				-1.6
1,262,563	-				-1.6
1,262,563	-				-0.1
1,262,563	-				+0.1
1,262,563	-				+0.6
1,262,563	-				-1.2
1,262,563	-				-1.6
1,262,563	-				+1.8
1,262,630	-				+1.0
1,262,630	-				+3.2
1,262,650	-				+0.8
1,262,720	-				+0.4
1,262,720	-				-2.6
1,262,720	-				-2.2