Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2630

Experiment: 5-Hydroxymethylfurfural 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 2.5 mM
2,722,121	+		Ga0059261_2629	0.22	-0.1
2,722,121	+		Ga0059261_2629	0.22	-0.6
2,722,121	+		Ga0059261_2629	0.22	+0.6
2,722,121	+		Ga0059261_2629	0.22	-0.4
2,722,121	+		Ga0059261_2629	0.22	+0.0
2,722,121	+		Ga0059261_2629	0.22	+0.3
2,722,121	+		Ga0059261_2629	0.22	+0.8
2,722,121	+				-0.4
2,722,121	+		Ga0059261_2629	0.22	-0.5
2,722,121	+		Ga0059261_2629	0.22	-0.7
2,722,121	+		Ga0059261_2629	0.22	-0.6
2,722,121	+				+1.2
2,722,121	+		Ga0059261_2629	0.22	-0.5
2,722,121	+		Ga0059261_2629	0.22	-0.2
2,722,121	+		Ga0059261_2629	0.22	+0.1
2,722,121	+		Ga0059261_2629	0.22	+0.6
2,722,121	+		Ga0059261_2629	0.22	+0.8
2,722,121	+		Ga0059261_2629	0.22	-0.3
2,722,121	+		Ga0059261_2629	0.22	-0.5
2,722,122	-		Ga0059261_2629	0.22	-0.8
2,722,122	-		Ga0059261_2629	0.22	-0.0
2,722,122	-		Ga0059261_2629	0.22	+0.0
2,722,122	-		Ga0059261_2629	0.22	+1.6
2,722,122	-		Ga0059261_2629	0.22	+0.1
2,722,122	-		Ga0059261_2629	0.22	-1.3
2,722,122	-		Ga0059261_2629	0.22	+0.0
2,722,122	-		Ga0059261_2629	0.22	-0.1
2,722,122	-		Ga0059261_2629	0.22	-0.5
2,722,122	-		Ga0059261_2629	0.22	+0.0
2,722,122	-		Ga0059261_2629	0.22	+0.8
2,722,122	-		Ga0059261_2629	0.22	-0.6
2,722,122	-		Ga0059261_2629	0.22	-0.2
2,722,122	-				-0.4
2,722,122	-		Ga0059261_2629	0.22	+0.6
2,722,122	-		Ga0059261_2629	0.22	-0.1
2,722,122	-		Ga0059261_2629	0.22	+0.0
2,722,122	-		Ga0059261_2629	0.22	-0.8
2,722,253	+		Ga0059261_2629	0.33	-0.7
2,722,253	+		Ga0059261_2629	0.33	+1.0
2,722,253	+		Ga0059261_2629	0.33	-0.4
2,722,253	+		Ga0059261_2629	0.33	-0.5
2,722,253	+		Ga0059261_2629	0.33	+0.6
2,722,253	+		Ga0059261_2629	0.33	-0.7
2,722,253	+		Ga0059261_2629	0.33	+0.4
2,722,253	+		Ga0059261_2629	0.33	+0.1
2,722,253	+		Ga0059261_2629	0.33	+0.4
2,722,253	+		Ga0059261_2629	0.33	+0.3
2,722,253	+		Ga0059261_2629	0.33	-0.7
2,722,254	-		Ga0059261_2629	0.34	-0.0
2,722,254	-		Ga0059261_2629	0.34	+0.8
2,722,254	-		Ga0059261_2629	0.34	-0.0
2,722,362	-		Ga0059261_2629	0.43	-0.4
2,722,526	+		Ga0059261_2629	0.57	-0.4
2,722,526	+		Ga0059261_2629	0.57	-0.4
2,722,526	+		Ga0059261_2629	0.57	+0.0
2,722,526	+		Ga0059261_2629	0.57	+0.2
2,722,527	-		Ga0059261_2629	0.57	+0.2
2,722,527	-		Ga0059261_2629	0.57	-0.7
2,722,527	-		Ga0059261_2629	0.57	+0.2
2,722,527	-		Ga0059261_2629	0.57	+0.0
2,722,527	-		Ga0059261_2629	0.57	-0.1
2,722,527	-		Ga0059261_2629	0.57	-0.6
2,722,527	-		Ga0059261_2629	0.57	-0.5
2,722,527	-		Ga0059261_2629	0.57	-0.5
2,722,528	+		Ga0059261_2629	0.58	-1.1
2,722,528	+		Ga0059261_2629	0.58	-0.3
2,722,528	+		Ga0059261_2629	0.58	+0.2
2,722,528	+		Ga0059261_2629	0.58	+0.9
2,722,528	+		Ga0059261_2629	0.58	+2.2
2,722,528	+		Ga0059261_2629	0.58	+0.9
2,722,528	+		Ga0059261_2629	0.58	+0.1
2,722,528	+		Ga0059261_2629	0.58	+0.3
2,722,528	+		Ga0059261_2629	0.58	-0.3
2,722,529	-		Ga0059261_2629	0.58	+0.0
2,722,529	-		Ga0059261_2629	0.58	+0.2
2,722,529	-		Ga0059261_2629	0.58	+0.6
2,722,529	-		Ga0059261_2629	0.58	+0.4
2,722,529	-		Ga0059261_2629	0.58	+0.3
2,722,776	+		Ga0059261_2629	0.79	+0.9
2,722,777	-		Ga0059261_2629	0.79	+1.4
2,722,868	+		Ga0059261_2629	0.87	-0.5
2,722,868	+		Ga0059261_2629	0.87	-0.5
2,722,868	+		Ga0059261_2629	0.87	+0.1
2,722,869	-		Ga0059261_2629	0.87	+0.2
2,722,869	-		Ga0059261_2629	0.87	+0.1
2,722,869	-		Ga0059261_2629	0.87	-2.1
2,722,869	-		Ga0059261_2629	0.87	-0.2
2,722,869	-		Ga0059261_2629	0.87	-1.0
2,722,869	-		Ga0059261_2629	0.87	+1.3
2,723,004	+				+0.8
2,723,004	+				-0.5
2,723,004	+				-0.1
2,723,005	-				-0.5
2,723,005	-				-0.3
2,723,005	-				-0.1
2,723,005	-				+0.3
2,723,005	-				+0.3
2,723,116	+		Ga0059261_2630	0.14	-0.0
2,723,116	+		Ga0059261_2630	0.14	-0.1
2,723,116	+		Ga0059261_2630	0.14	-0.4
2,723,116	+		Ga0059261_2630	0.14	-1.7
2,723,116	+				-1.0
2,723,116	+		Ga0059261_2630	0.14	+0.8
2,723,116	+		Ga0059261_2630	0.14	+0.0
2,723,116	+		Ga0059261_2630	0.14	-0.1
2,723,116	+		Ga0059261_2630	0.14	-1.1
2,723,116	+		Ga0059261_2630	0.14	+0.3
2,723,116	+		Ga0059261_2630	0.14	-0.2
2,723,117	-		Ga0059261_2630	0.14	-0.0
2,723,117	-		Ga0059261_2630	0.14	+0.1
2,723,117	-		Ga0059261_2630	0.14	-0.5
2,723,117	-		Ga0059261_2630	0.14	-1.2
2,723,117	-		Ga0059261_2630	0.14	-0.1
2,723,117	-		Ga0059261_2630	0.14	-0.3
2,723,365	+		Ga0059261_2630	0.47	+0.5
2,723,365	+		Ga0059261_2630	0.47	-0.3
2,723,365	+		Ga0059261_2630	0.47	-0.0
2,723,365	+		Ga0059261_2630	0.47	+0.5
2,723,366	-		Ga0059261_2630	0.47	-0.4
2,723,368	+		Ga0059261_2630	0.47	+0.3
2,723,368	+				+2.2
2,723,368	+		Ga0059261_2630	0.47	+0.2
2,723,368	+		Ga0059261_2630	0.47	+0.3
2,723,368	+		Ga0059261_2630	0.47	-1.4
2,723,368	+		Ga0059261_2630	0.47	-0.3
2,723,368	+		Ga0059261_2630	0.47	-0.8
2,723,368	+		Ga0059261_2630	0.47	-0.2
2,723,368	+		Ga0059261_2630	0.47	+0.1
2,723,368	+		Ga0059261_2630	0.47	+0.6
2,723,368	+				+0.6
2,723,368	+		Ga0059261_2630	0.47	-0.3
2,723,368	+		Ga0059261_2630	0.47	-0.2
2,723,368	+		Ga0059261_2630	0.47	-0.5
2,723,368	+		Ga0059261_2630	0.47	-0.4
2,723,368	+		Ga0059261_2630	0.47	-0.3
2,723,368	+		Ga0059261_2630	0.47	+0.1
2,723,368	+		Ga0059261_2630	0.47	-0.1
2,723,368	+		Ga0059261_2630	0.47	-0.3
2,723,368	+		Ga0059261_2630	0.47	-0.2
2,723,369	-		Ga0059261_2630	0.47	+0.0
2,723,369	-		Ga0059261_2630	0.47	+0.3
2,723,369	-		Ga0059261_2630	0.47	-0.4
2,723,369	-		Ga0059261_2630	0.47	-0.4
2,723,369	-		Ga0059261_2630	0.47	+0.8
2,723,369	-		Ga0059261_2630	0.47	-0.4
2,723,369	-		Ga0059261_2630	0.47	-1.0
2,723,369	-		Ga0059261_2630	0.47	+0.3
2,723,369	-		Ga0059261_2630	0.47	-0.1
2,723,369	-		Ga0059261_2630	0.47	+0.5
2,723,369	-		Ga0059261_2630	0.47	-0.8
2,723,369	-		Ga0059261_2630	0.47	-0.4
2,723,369	-		Ga0059261_2630	0.47	-0.6
2,723,369	-		Ga0059261_2630	0.47	+0.7
2,723,433	-		Ga0059261_2630	0.56	+2.2
2,723,464	+		Ga0059261_2630	0.60	+0.6
2,723,465	-		Ga0059261_2630	0.60	+0.0
2,723,476	+		Ga0059261_2630	0.61	+0.2
2,723,476	+		Ga0059261_2630	0.61	+0.1
2,723,476	+		Ga0059261_2630	0.61	+0.0
2,723,476	+		Ga0059261_2630	0.61	+0.4
2,723,477	-		Ga0059261_2630	0.61	-0.8
2,723,477	-		Ga0059261_2630	0.61	-0.3
2,723,477	-		Ga0059261_2630	0.61	-1.4
2,723,477	-		Ga0059261_2630	0.61	-0.6
2,723,477	-		Ga0059261_2630	0.61	+0.3
2,723,716	+				+0.2
2,723,716	+				-0.4
2,723,716	+				+0.3
2,723,716	+				-0.9
2,723,717	-				-0.2
2,723,717	-				+0.5
2,723,717	-				+0.4
2,723,717	-				+0.3
2,723,717	-				-0.2
2,723,717	-				+0.8
2,723,717	-				-0.2
2,723,770	+				-1.2
2,723,770	+				-0.4
2,723,771	-				-0.1
2,723,932	+				-1.0
2,723,932	+				-0.1
2,723,933	-				+0.7
2,723,933	-				-0.6
2,723,933	-				+0.0
2,724,127	+		Ga0059261_2631	0.22	+0.2
2,724,128	-		Ga0059261_2631	0.22	+0.2
2,724,205	+		Ga0059261_2631	0.28	-0.0
2,724,205	+		Ga0059261_2631	0.28	+0.2
2,724,206	-		Ga0059261_2631	0.28	+1.0
2,724,206	-		Ga0059261_2631	0.28	+0.0
2,724,206	-		Ga0059261_2631	0.28	-0.2
2,724,206	-		Ga0059261_2631	0.28	+0.5
2,724,206	-		Ga0059261_2631	0.28	+1.2
2,724,208	+		Ga0059261_2631	0.28	+0.2
2,724,208	+		Ga0059261_2631	0.28	-0.2
2,724,208	+		Ga0059261_2631	0.28	+0.9
2,724,208	+		Ga0059261_2631	0.28	-0.6
2,724,208	+		Ga0059261_2631	0.28	-2.0
2,724,208	+		Ga0059261_2631	0.28	+0.6
2,724,209	-		Ga0059261_2631	0.28	-0.1
2,724,209	-		Ga0059261_2631	0.28	+0.4
2,724,209	-		Ga0059261_2631	0.28	-0.1
2,724,209	-		Ga0059261_2631	0.28	+0.2
2,724,292	+		Ga0059261_2631	0.33	-0.1
2,724,292	+		Ga0059261_2631	0.33	+0.3
2,724,292	+		Ga0059261_2631	0.33	+0.4
2,724,292	+		Ga0059261_2631	0.33	-0.9
2,724,582	+		Ga0059261_2631	0.53	+0.1
2,724,582	+		Ga0059261_2631	0.53	+0.2
2,724,583	-		Ga0059261_2631	0.53	-0.2
2,724,583	-		Ga0059261_2631	0.53	-0.2
2,724,583	-		Ga0059261_2631	0.53	-0.8
2,724,583	-		Ga0059261_2631	0.53	+0.7
2,724,583	-		Ga0059261_2631	0.53	-0.2
2,724,583	-		Ga0059261_2631	0.53	+0.4