Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2401

Experiment: 5-Hydroxymethylfurfural 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 2.5 mM
2,496,580	+		Ga0059261_2400	0.42	+1.1
2,496,580	+		Ga0059261_2400	0.42	-0.3
2,496,580	+		Ga0059261_2400	0.42	-0.3
2,496,581	-		Ga0059261_2400	0.42	+1.0
2,496,581	-		Ga0059261_2400	0.42	+0.1
2,496,581	-		Ga0059261_2400	0.42	+0.2
2,496,581	-		Ga0059261_2400	0.42	-0.0
2,496,581	-		Ga0059261_2400	0.42	+0.0
2,496,581	-		Ga0059261_2400	0.42	-0.3
2,496,581	-		Ga0059261_2400	0.42	-0.1
2,496,581	-		Ga0059261_2400	0.42	+0.5
2,496,581	-		Ga0059261_2400	0.42	-0.9
2,496,581	-		Ga0059261_2400	0.42	+0.1
2,496,581	-		Ga0059261_2400	0.42	-0.3
2,497,036	+				+0.1
2,497,036	+				-0.3
2,497,036	+				-0.1
2,497,037	-				+0.1
2,497,248	+		Ga0059261_2401	0.30	+0.2
2,497,248	+		Ga0059261_2401	0.30	-0.3
2,497,461	+				+0.7
2,497,461	+		Ga0059261_2401	0.61	+0.1
2,497,461	+		Ga0059261_2401	0.61	-0.3
2,497,461	+		Ga0059261_2401	0.61	+0.9
2,497,461	+		Ga0059261_2401	0.61	-0.5
2,497,461	+		Ga0059261_2401	0.61	-0.2
2,497,461	+		Ga0059261_2401	0.61	-0.6
2,497,461	+		Ga0059261_2401	0.61	-0.3
2,497,461	+		Ga0059261_2401	0.61	-0.7
2,497,461	+		Ga0059261_2401	0.61	+0.3
2,497,461	+		Ga0059261_2401	0.61	+0.6
2,497,461	+		Ga0059261_2401	0.61	-0.1
2,497,461	+		Ga0059261_2401	0.61	+0.9
2,497,461	+		Ga0059261_2401	0.61	+0.1
2,497,461	+		Ga0059261_2401	0.61	+0.4
2,497,461	+		Ga0059261_2401	0.61	+0.1
2,497,461	+		Ga0059261_2401	0.61	+0.3
2,497,461	+		Ga0059261_2401	0.61	+0.5
2,497,461	+		Ga0059261_2401	0.61	-0.7
2,497,461	+		Ga0059261_2401	0.61	-0.4
2,497,461	+		Ga0059261_2401	0.61	+0.4
2,497,461	+		Ga0059261_2401	0.61	+0.3
2,497,462	-		Ga0059261_2401	0.61	-0.0
2,497,462	-		Ga0059261_2401	0.61	-1.2
2,497,462	-		Ga0059261_2401	0.61	-0.3
2,497,462	-		Ga0059261_2401	0.61	-0.1
2,497,462	-		Ga0059261_2401	0.61	+0.1
2,497,462	-		Ga0059261_2401	0.61	-0.6
2,497,462	-		Ga0059261_2401	0.61	-0.9
2,497,462	-		Ga0059261_2401	0.61	-0.0
2,497,462	-		Ga0059261_2401	0.61	+0.5
2,497,462	-		Ga0059261_2401	0.61	-0.3
2,497,462	-		Ga0059261_2401	0.61	-0.1
2,497,530	+		Ga0059261_2401	0.71	-0.6
2,497,530	+		Ga0059261_2401	0.71	+0.0
2,497,530	+		Ga0059261_2401	0.71	-1.1
2,497,530	+		Ga0059261_2401	0.71	-0.2
2,497,530	+		Ga0059261_2401	0.71	-0.1
2,497,530	+		Ga0059261_2401	0.71	-0.8
2,497,531	-		Ga0059261_2401	0.72	+0.3
2,497,531	-		Ga0059261_2401	0.72	+0.1
2,497,531	-		Ga0059261_2401	0.72	+0.2
2,497,531	-		Ga0059261_2401	0.72	+0.4
2,497,531	-		Ga0059261_2401	0.72	-0.4
2,497,531	-		Ga0059261_2401	0.72	+0.2
2,497,532	+		Ga0059261_2401	0.72	+0.1
2,497,532	+		Ga0059261_2401	0.72	-0.0
2,497,533	-		Ga0059261_2401	0.72	+0.7
2,497,533	-		Ga0059261_2401	0.72	-0.2
2,497,533	-		Ga0059261_2401	0.72	+1.7
2,497,533	-		Ga0059261_2401	0.72	-2.2
2,497,533	-		Ga0059261_2401	0.72	+0.3
2,497,533	-		Ga0059261_2401	0.72	+1.4
2,497,533	-		Ga0059261_2401	0.72	+0.2
2,497,592	-		Ga0059261_2401	0.80	-0.7
2,497,899	+				-0.5
2,497,899	+				+0.1
2,497,900	-				+1.5
2,497,900	-				-0.3
2,497,900	-				-1.3
2,497,900	-				+0.1
2,497,923	+		Ga0059261_2402	0.11	-0.4
2,497,923	+		Ga0059261_2402	0.11	+0.1
2,497,923	+		Ga0059261_2402	0.11	+0.1
2,497,923	+		Ga0059261_2402	0.11	-0.1
2,497,924	-		Ga0059261_2402	0.11	-0.6
2,497,924	-		Ga0059261_2402	0.11	+1.5
2,497,924	-		Ga0059261_2402	0.11	-0.2
2,497,924	-		Ga0059261_2402	0.11	+0.1
2,497,924	-		Ga0059261_2402	0.11	-0.2
2,497,924	-		Ga0059261_2402	0.11	+0.1
2,497,924	-		Ga0059261_2402	0.11	-1.7
2,497,924	-		Ga0059261_2402	0.11	+0.5
2,497,924	-		Ga0059261_2402	0.11	-0.3
2,498,199	+		Ga0059261_2402	0.36	-0.8
2,498,205	+		Ga0059261_2402	0.36	+0.1
2,498,304	+		Ga0059261_2402	0.45	-0.6
2,498,304	+		Ga0059261_2402	0.45	+0.7
2,498,304	+		Ga0059261_2402	0.45	+0.1
2,498,304	+		Ga0059261_2402	0.45	-0.3
2,498,305	-		Ga0059261_2402	0.45	-0.9
2,498,305	-		Ga0059261_2402	0.45	-0.3
2,498,418	+		Ga0059261_2402	0.56	-0.5
2,498,418	+		Ga0059261_2402	0.56	+1.2
2,498,419	-		Ga0059261_2402	0.56	+0.2
2,498,419	-		Ga0059261_2402	0.56	-0.5
2,498,478	-		Ga0059261_2402	0.61	-0.3
2,498,666	+		Ga0059261_2402	0.78	-0.7
2,498,666	+		Ga0059261_2402	0.78	+0.2
2,498,666	+		Ga0059261_2402	0.78	+0.4
2,498,666	+		Ga0059261_2402	0.78	-0.3
2,498,667	-		Ga0059261_2402	0.78	+1.7
2,498,667	-		Ga0059261_2402	0.78	+0.1
2,498,667	-		Ga0059261_2402	0.78	+0.1
2,498,667	-		Ga0059261_2402	0.78	-0.3
2,498,667	-		Ga0059261_2402	0.78	+0.1
2,498,667	-		Ga0059261_2402	0.78	-0.3
2,498,667	-		Ga0059261_2402	0.78	-0.0
2,498,667	-		Ga0059261_2402	0.78	-0.9
2,498,667	-		Ga0059261_2402	0.78	-1.2
2,498,667	-		Ga0059261_2402	0.78	-1.3
2,498,667	-		Ga0059261_2402	0.78	+0.2
2,498,667	-		Ga0059261_2402	0.78	+0.2
2,498,670	+		Ga0059261_2402	0.78	-0.0
2,498,670	+		Ga0059261_2402	0.78	-0.8
2,498,670	+		Ga0059261_2402	0.78	-0.8
2,498,670	+		Ga0059261_2402	0.78	-0.3
2,498,670	+		Ga0059261_2402	0.78	-0.4
2,498,670	+		Ga0059261_2402	0.78	-0.7
2,498,671	-		Ga0059261_2402	0.78	+0.7
2,498,671	-		Ga0059261_2402	0.78	+0.4
2,498,671	-		Ga0059261_2402	0.78	-0.2
2,498,679	+				-0.3
2,498,679	+		Ga0059261_2402	0.79	-0.3
2,498,679	+		Ga0059261_2402	0.79	-0.0
2,498,680	-		Ga0059261_2402	0.79	-0.2
2,498,680	-		Ga0059261_2402	0.79	+0.7