Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_22905

Experiment: Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0001 mg/ml
5,114,230	+				+0.3
5,114,230	+				-0.6
5,114,230	+				-0.4
5,114,230	+				+0.6
5,114,230	+				+0.5
5,114,231	-				-0.1
5,114,231	-				+0.4
5,114,321	+				+0.0
5,114,322	-				-0.1
5,114,367	-		AO356_22900	0.12	+0.4
5,114,385	+		AO356_22900	0.16	-0.5
5,114,385	+		AO356_22900	0.16	+0.3
5,114,385	+		AO356_22900	0.16	-0.8
5,114,386	-		AO356_22900	0.16	+0.2
5,114,386	-		AO356_22900	0.16	-0.1
5,114,386	-		AO356_22900	0.16	-0.9
5,114,416	+		AO356_22900	0.22	+0.2
5,114,417	-		AO356_22900	0.22	+0.9
5,114,493	+		AO356_22900	0.38	-0.2
5,114,494	-		AO356_22900	0.38	-0.4
5,114,501	+		AO356_22900	0.40	+0.9
5,114,502	-		AO356_22900	0.40	-0.5
5,114,578	+		AO356_22900	0.55	+0.1
5,114,579	-		AO356_22900	0.56	-0.9
5,114,593	-		AO356_22900	0.58	-1.2
5,114,630	+		AO356_22900	0.66	+1.1
5,114,632	+		AO356_22900	0.66	-0.6
5,114,632	+		AO356_22900	0.66	+0.5
5,114,705	-		AO356_22900	0.81	+1.3
5,114,708	+		AO356_22900	0.82	+0.5
5,114,709	-		AO356_22900	0.82	+0.7
5,114,715	+		AO356_22900	0.83	-0.0
5,114,746	-		AO356_22900	0.90	-0.3
5,114,799	+				+0.2
5,114,800	-				-0.2
5,114,826	+				+0.6
5,114,853	+				-0.5
5,114,868	-				+1.2
5,114,868	-				+0.3
5,114,868	-				-0.6
5,114,868	-				-0.4
5,114,868	-				-0.7
5,114,868	-				+0.5
5,114,902	-				+0.5
5,115,023	+				+0.6
5,115,024	-				+0.8
5,115,037	+				+1.2
5,115,053	-				-0.2
5,115,053	-				-0.2
5,115,068	+				+0.3
5,115,068	+				+0.2
5,115,069	-				-0.3
5,115,069	-				+1.3
5,115,069	-				-0.4
5,115,069	-				-0.6
5,115,069	-				+0.7
5,115,070	+				-0.1
5,115,071	-				-0.3
5,115,282	+				-0.6
5,115,519	+		AO356_22905	0.42	-0.4
5,115,519	+		AO356_22905	0.42	+1.5
5,115,520	-		AO356_22905	0.42	-1.1
5,115,520	-		AO356_22905	0.42	+1.3
5,115,520	-		AO356_22905	0.42	+0.3
5,115,520	-		AO356_22905	0.42	-0.2
5,115,520	-		AO356_22905	0.42	-0.7
5,115,702	+		AO356_22905	0.68	-1.8
5,115,702	+		AO356_22905	0.68	-2.7
5,115,703	-		AO356_22905	0.68	-1.2
5,115,703	-		AO356_22905	0.68	-0.2
5,115,955	+				-0.3
5,115,992	-				+0.7
5,115,992	-				-0.4
5,115,992	-				-0.3
5,116,043	-				-1.1
5,116,043	-				-0.4
5,116,055	-				-1.9
5,116,345	+		AO356_22910	0.32	-0.9
5,116,346	-		AO356_22910	0.32	+0.6
5,116,346	-		AO356_22910	0.32	+0.9
5,116,479	+		AO356_22910	0.42	+1.0
5,116,479	+		AO356_22910	0.42	+0.1
5,116,741	+		AO356_22910	0.62	+2.3
5,116,741	+		AO356_22910	0.62	+1.1
5,116,742	-		AO356_22910	0.62	+1.0