Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_19220

Experiment: Tetracycline 0.0001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tetracycline 0.0001 mg/ml
4,312,196	+				-0.2
4,312,197	-				-0.3
4,312,199	+				-0.1
4,312,200	-				+0.6
4,312,215	-				+0.1
4,312,403	+				+0.2
4,312,403	+				+0.1
4,312,404	-				+0.6
4,312,404	-				-0.1
4,312,404	-				-1.5
4,312,404	-				+0.5
4,312,404	-				+0.3
4,312,404	-				-0.7
4,312,405	+				+0.1
4,312,421	+				+1.2
4,312,422	-				+0.4
4,312,422	-				+0.3
4,312,422	-				+0.2
4,312,422	-				+0.1
4,312,482	-				+0.8
4,312,530	+				-0.5
4,312,651	+				+0.4
4,312,652	-				+0.7
4,312,702	+				+0.3
4,312,702	+				-0.3
4,312,702	+				+1.2
4,312,703	-				+0.6
4,312,703	-				-0.5
4,312,703	-				+1.1
4,312,739	+				+0.3
4,312,739	+				-1.6
4,312,757	-				+1.4
4,312,757	-				-0.3
4,312,769	+				-0.4
4,312,769	+				+0.5
4,312,770	-				+0.5
4,312,770	-				-0.2
4,312,770	-				-0.4
4,312,770	-				-2.1
4,312,805	+		AO356_19215	0.20	+0.0
4,312,805	+		AO356_19215	0.20	+0.2
4,312,805	+		AO356_19215	0.20	-0.0
4,312,805	+		AO356_19215	0.20	-0.6
4,312,806	-		AO356_19215	0.20	-1.5
4,312,806	-		AO356_19215	0.20	-0.1
4,312,806	-		AO356_19215	0.20	-0.5
4,312,806	-		AO356_19215	0.20	-0.6
4,312,806	-		AO356_19215	0.20	+0.1
4,312,806	-		AO356_19215	0.20	-0.1
4,312,806	-		AO356_19215	0.20	-0.9
4,312,806	-		AO356_19215	0.20	-1.4
4,312,806	-		AO356_19215	0.20	+0.1
4,312,806	-		AO356_19215	0.20	-0.3
4,312,916	-		AO356_19215	0.54	-0.4
4,313,116	+				-1.0
4,313,117	-				+0.1
4,313,117	-				-0.0
4,313,117	-				+0.1
4,313,117	-				+3.2
4,313,730	-		AO356_19220	0.39	+0.2
4,313,730	-		AO356_19220	0.39	+1.1
4,313,857	+		AO356_19220	0.48	+0.9
4,313,858	-		AO356_19220	0.48	-0.3
4,313,922	-		AO356_19220	0.52	+0.8
4,313,984	+		AO356_19220	0.56	+0.7
4,313,984	+		AO356_19220	0.56	-0.7
4,313,984	+		AO356_19220	0.56	-0.5
4,313,984	+		AO356_19220	0.56	+0.2
4,314,038	+		AO356_19220	0.60	-0.2
4,314,038	+		AO356_19220	0.60	-0.1
4,314,038	+		AO356_19220	0.60	-0.1
4,314,047	+		AO356_19220	0.60	+0.0
4,314,047	+		AO356_19220	0.60	-0.5
4,314,048	-		AO356_19220	0.61	-0.8
4,314,048	-		AO356_19220	0.61	+0.3
4,314,048	-		AO356_19220	0.61	-0.5
4,314,099	+		AO356_19220	0.64	-1.1
4,314,099	+		AO356_19220	0.64	-3.5
4,314,099	+		AO356_19220	0.64	-0.5
4,314,100	-		AO356_19220	0.64	+0.9
4,314,100	-		AO356_19220	0.64	-1.5
4,314,100	-		AO356_19220	0.64	-0.8
4,314,100	-		AO356_19220	0.64	+0.1
4,314,100	-		AO356_19220	0.64	+0.6
4,314,100	-		AO356_19220	0.64	+0.5
4,314,100	-		AO356_19220	0.64	-0.6
4,314,100	-		AO356_19220	0.64	+0.2
4,314,100	-		AO356_19220	0.64	-0.3
4,314,100	-		AO356_19220	0.64	-0.4
4,314,100	-		AO356_19220	0.64	+0.0
4,314,100	-		AO356_19220	0.64	-0.6
4,314,100	-		AO356_19220	0.64	-0.5
4,314,143	+		AO356_19220	0.67	+0.0
4,314,144	-		AO356_19220	0.67	+0.8
4,314,144	-		AO356_19220	0.67	-0.5
4,314,144	-		AO356_19220	0.67	-0.3
4,314,144	-		AO356_19220	0.67	-0.2
4,314,144	-		AO356_19220	0.67	-0.5
4,314,144	-		AO356_19220	0.67	-1.8
4,314,144	-		AO356_19220	0.67	-0.5
4,314,455	+		AO356_19220	0.88	-0.2
4,314,455	+		AO356_19220	0.88	-0.7
4,314,456	-		AO356_19220	0.88	+0.2
4,314,456	-		AO356_19220	0.88	-0.4
4,314,456	-		AO356_19220	0.88	-0.8
4,314,681	+				-1.3
4,314,681	+				-0.1
4,314,681	+				-0.6
4,314,788	+				+0.3
4,314,789	-				+0.1
4,314,789	-				+1.6
4,314,851	+				-0.1
4,314,852	-				+0.2
4,315,093	+				-0.1
4,315,093	+				-0.3
4,315,094	-				-1.2
4,315,094	-				+0.3
4,315,261	+		AO356_19225	0.14	+0.6
4,315,262	-		AO356_19225	0.14	-0.5
4,315,272	+		AO356_19225	0.14	-0.3
4,315,273	-		AO356_19225	0.14	-0.8
4,315,273	-		AO356_19225	0.14	+0.5
4,315,273	-		AO356_19225	0.14	+0.9
4,315,453	+		AO356_19225	0.19	+0.0
4,315,526	-		AO356_19225	0.21	+0.6