Experiment: Tetracycline 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03300 and AO356_03305 are separated by 191 nucleotides AO356_03305 and AO356_03310 are separated by 204 nucleotides AO356_03310 and AO356_03315 are separated by 10 nucleotides
AO356_03300: AO356_03300 - histidine kinase, at 730,424 to 733,075
_03300
AO356_03305: AO356_03305 - ATPase, at 733,267 to 733,812
_03305
AO356_03310: AO356_03310 - potassium-transporting ATPase subunit B, at 734,017 to 736,071
_03310
AO356_03315: AO356_03315 - ATPase, at 736,082 to 737,776
_03315
Position (kb) 734
735
736
737 Strain fitness (log2 ratio) -2
-1
0
1 at 733.097 kb on + strand at 733.098 kb on - strand at 733.098 kb on - strand at 733.143 kb on + strand at 733.144 kb on - strand at 733.144 kb on - strand at 733.269 kb on - strand at 733.561 kb on - strand, within AO356_03305 at 733.745 kb on + strand, within AO356_03305 at 733.777 kb on + strand at 733.778 kb on - strand at 733.778 kb on - strand at 734.046 kb on + strand at 734.046 kb on + strand at 734.047 kb on - strand at 734.047 kb on - strand at 734.047 kb on - strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.097 kb on - strand at 734.097 kb on - strand at 734.271 kb on - strand, within AO356_03310 at 734.271 kb on - strand, within AO356_03310 at 734.271 kb on - strand, within AO356_03310 at 734.306 kb on + strand, within AO356_03310 at 734.306 kb on + strand, within AO356_03310 at 734.560 kb on - strand, within AO356_03310 at 734.883 kb on + strand, within AO356_03310 at 734.884 kb on - strand, within AO356_03310 at 734.888 kb on + strand, within AO356_03310 at 734.888 kb on + strand, within AO356_03310 at 734.888 kb on + strand, within AO356_03310 at 734.889 kb on - strand, within AO356_03310 at 734.903 kb on + strand, within AO356_03310 at 734.903 kb on + strand, within AO356_03310 at 734.904 kb on - strand, within AO356_03310 at 734.996 kb on + strand, within AO356_03310 at 734.996 kb on + strand, within AO356_03310 at 735.092 kb on + strand, within AO356_03310 at 735.092 kb on + strand, within AO356_03310 at 735.093 kb on - strand, within AO356_03310 at 735.102 kb on + strand, within AO356_03310 at 735.102 kb on + strand, within AO356_03310 at 735.493 kb on + strand, within AO356_03310 at 735.493 kb on + strand, within AO356_03310 at 735.494 kb on - strand, within AO356_03310 at 735.874 kb on - strand at 736.065 kb on + strand at 736.065 kb on + strand at 736.065 kb on + strand at 736.066 kb on - strand at 736.066 kb on - strand at 736.066 kb on - strand at 736.066 kb on - strand at 736.066 kb on - strand at 736.279 kb on - strand, within AO356_03315 at 736.386 kb on + strand, within AO356_03315 at 736.387 kb on - strand, within AO356_03315 at 736.387 kb on - strand, within AO356_03315 at 736.392 kb on + strand, within AO356_03315 at 736.392 kb on + strand, within AO356_03315 at 736.392 kb on + strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.393 kb on - strand, within AO356_03315 at 736.623 kb on + strand, within AO356_03315 at 736.858 kb on - strand, within AO356_03315 at 736.948 kb on - strand, within AO356_03315 at 736.948 kb on - strand, within AO356_03315 at 736.948 kb on - strand, within AO356_03315
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0001 mg/ml remove 733,097 + -0.2 733,098 - +0.2 733,098 - +0.6 733,143 + -0.2 733,144 - +1.7 733,144 - +0.1 733,269 - -0.8 733,561 - AO356_03305 0.54 -0.9 733,745 + AO356_03305 0.88 -0.9 733,777 + -0.0 733,778 - -0.1 733,778 - -0.7 734,046 + -0.1 734,046 + +0.3 734,047 - -1.0 734,047 - -0.2 734,047 - +0.7 734,096 + +0.2 734,096 + -0.7 734,096 + +1.3 734,096 + +0.5 734,096 + -1.0 734,096 + +0.2 734,096 + +0.6 734,097 - +0.7 734,097 - +1.0 734,271 - AO356_03310 0.12 +0.9 734,271 - AO356_03310 0.12 -0.4 734,271 - AO356_03310 0.12 +0.4 734,306 + AO356_03310 0.14 -0.2 734,306 + AO356_03310 0.14 +0.3 734,560 - AO356_03310 0.26 +0.2 734,883 + AO356_03310 0.42 -1.1 734,884 - AO356_03310 0.42 +0.1 734,888 + AO356_03310 0.42 -0.9 734,888 + AO356_03310 0.42 +0.9 734,888 + AO356_03310 0.42 +1.2 734,889 - AO356_03310 0.42 -0.1 734,903 + AO356_03310 0.43 -0.1 734,903 + AO356_03310 0.43 -0.3 734,904 - AO356_03310 0.43 +0.3 734,996 + AO356_03310 0.48 +0.9 734,996 + AO356_03310 0.48 +1.5 735,092 + AO356_03310 0.52 +0.5 735,092 + AO356_03310 0.52 +0.3 735,093 - AO356_03310 0.52 -0.3 735,102 + AO356_03310 0.53 -0.2 735,102 + AO356_03310 0.53 +0.0 735,493 + AO356_03310 0.72 -0.4 735,493 + AO356_03310 0.72 +0.1 735,494 - AO356_03310 0.72 +0.5 735,874 - +0.3 736,065 + -0.2 736,065 + +0.9 736,065 + +0.1 736,066 - -0.4 736,066 - +0.4 736,066 - +0.9 736,066 - -0.6 736,066 - -0.1 736,279 - AO356_03315 0.12 -1.0 736,386 + AO356_03315 0.18 -0.4 736,387 - AO356_03315 0.18 +0.2 736,387 - AO356_03315 0.18 +0.3 736,392 + AO356_03315 0.18 +0.7 736,392 + AO356_03315 0.18 -0.1 736,392 + AO356_03315 0.18 -0.2 736,393 - AO356_03315 0.18 +0.6 736,393 - AO356_03315 0.18 +1.5 736,393 - AO356_03315 0.18 +0.2 736,393 - AO356_03315 0.18 -1.0 736,393 - AO356_03315 0.18 +0.7 736,393 - AO356_03315 0.18 +0.1 736,393 - AO356_03315 0.18 +0.1 736,393 - AO356_03315 0.18 -0.2 736,623 + AO356_03315 0.32 +1.4 736,858 - AO356_03315 0.46 -2.1 736,948 - AO356_03315 0.51 +0.4 736,948 - AO356_03315 0.51 -0.6 736,948 - AO356_03315 0.51 +1.0
Or see this region's nucleotide sequence