Experiment: Tetracycline 0.0001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_03300 and AO356_03305 are separated by 191 nucleotides AO356_03305 and AO356_03310 are separated by 204 nucleotides
AO356_03300: AO356_03300 - histidine kinase, at 730,424 to 733,075
_03300
AO356_03305: AO356_03305 - ATPase, at 733,267 to 733,812
_03305
AO356_03310: AO356_03310 - potassium-transporting ATPase subunit B, at 734,017 to 736,071
_03310
Position (kb) 733
734 Strain fitness (log2 ratio) -1
0
1 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.495 kb on + strand, within AO356_03300 at 732.496 kb on - strand, within AO356_03300 at 732.496 kb on - strand, within AO356_03300 at 732.623 kb on + strand, within AO356_03300 at 732.669 kb on + strand, within AO356_03300 at 732.670 kb on - strand, within AO356_03300 at 732.969 kb on + strand at 732.969 kb on + strand at 732.969 kb on + strand at 732.970 kb on - strand at 732.970 kb on - strand at 732.970 kb on - strand at 733.097 kb on + strand at 733.098 kb on - strand at 733.098 kb on - strand at 733.143 kb on + strand at 733.144 kb on - strand at 733.144 kb on - strand at 733.269 kb on - strand at 733.561 kb on - strand, within AO356_03305 at 733.745 kb on + strand, within AO356_03305 at 733.777 kb on + strand at 733.778 kb on - strand at 733.778 kb on - strand at 734.046 kb on + strand at 734.046 kb on + strand at 734.047 kb on - strand at 734.047 kb on - strand at 734.047 kb on - strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.096 kb on + strand at 734.097 kb on - strand at 734.097 kb on - strand at 734.271 kb on - strand, within AO356_03310 at 734.271 kb on - strand, within AO356_03310 at 734.271 kb on - strand, within AO356_03310 at 734.306 kb on + strand, within AO356_03310 at 734.306 kb on + strand, within AO356_03310 at 734.560 kb on - strand, within AO356_03310
Per-strain Table
Position Strand Gene LocusTag Fraction Tetracycline 0.0001 mg/ml remove 732,495 + AO356_03300 0.78 -0.7 732,495 + AO356_03300 0.78 +0.4 732,495 + AO356_03300 0.78 -0.2 732,495 + AO356_03300 0.78 -0.7 732,495 + AO356_03300 0.78 +0.3 732,496 - AO356_03300 0.78 +0.8 732,496 - AO356_03300 0.78 +0.1 732,623 + AO356_03300 0.83 +0.4 732,669 + AO356_03300 0.85 +0.4 732,670 - AO356_03300 0.85 +0.0 732,969 + +0.0 732,969 + +0.2 732,969 + -0.3 732,970 - +0.7 732,970 - +0.7 732,970 - +0.1 733,097 + -0.2 733,098 - +0.2 733,098 - +0.6 733,143 + -0.2 733,144 - +1.7 733,144 - +0.1 733,269 - -0.8 733,561 - AO356_03305 0.54 -0.9 733,745 + AO356_03305 0.88 -0.9 733,777 + -0.0 733,778 - -0.1 733,778 - -0.7 734,046 + -0.1 734,046 + +0.3 734,047 - -1.0 734,047 - -0.2 734,047 - +0.7 734,096 + +0.2 734,096 + -0.7 734,096 + +1.3 734,096 + +0.5 734,096 + -1.0 734,096 + +0.2 734,096 + +0.6 734,097 - +0.7 734,097 - +1.0 734,271 - AO356_03310 0.12 +0.9 734,271 - AO356_03310 0.12 -0.4 734,271 - AO356_03310 0.12 +0.4 734,306 + AO356_03310 0.14 -0.2 734,306 + AO356_03310 0.14 +0.3 734,560 - AO356_03310 0.26 +0.2
Or see this region's nucleotide sequence