Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4191 and Dshi_4192 are separated by 92 nucleotides Dshi_4192 and Dshi_4193 overlap by 4 nucleotides Dshi_4193 and Dshi_4194 are separated by 20 nucleotides
Dshi_4191: Dshi_4191 - TRAP dicarboxylate transporter, DctP subunit (RefSeq), at 37,297 to 38,292
_4191
Dshi_4192: Dshi_4192 - Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq), at 38,385 to 38,972
_4192
Dshi_4193: Dshi_4193 - TRAP dicarboxylate transporter, DctM subunit (RefSeq), at 38,969 to 40,258
_4193
Dshi_4194: Dshi_4194 - Gamma-glutamyltransferase (RefSeq), at 40,279 to 41,874
_4194
Position (kb) 38
39
40
41 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 38.008 kb on + strand, within Dshi_4191 at 38.041 kb on - strand, within Dshi_4191 at 38.059 kb on - strand, within Dshi_4191 at 38.066 kb on + strand, within Dshi_4191 at 38.401 kb on - strand at 38.849 kb on + strand, within Dshi_4192 at 38.849 kb on + strand, within Dshi_4192 at 38.857 kb on - strand, within Dshi_4192 at 38.898 kb on + strand, within Dshi_4192 at 39.196 kb on - strand, within Dshi_4193 at 39.257 kb on + strand, within Dshi_4193 at 39.448 kb on + strand, within Dshi_4193 at 39.721 kb on - strand, within Dshi_4193 at 39.915 kb on - strand, within Dshi_4193 at 40.101 kb on + strand, within Dshi_4193 at 40.275 kb on - strand at 40.561 kb on + strand, within Dshi_4194 at 40.791 kb on + strand, within Dshi_4194
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 38,008 + Dshi_4191 0.71 +0.0 38,041 - Dshi_4191 0.75 -0.9 38,059 - Dshi_4191 0.77 +1.0 38,066 + Dshi_4191 0.77 -0.2 38,401 - +1.8 38,849 + Dshi_4192 0.79 +0.0 38,849 + Dshi_4192 0.79 -1.3 38,857 - Dshi_4192 0.80 -3.4 38,898 + Dshi_4192 0.87 -2.6 39,196 - Dshi_4193 0.18 -0.6 39,257 + Dshi_4193 0.22 +1.2 39,448 + Dshi_4193 0.37 +0.2 39,721 - Dshi_4193 0.58 +0.8 39,915 - Dshi_4193 0.73 +1.9 40,101 + Dshi_4193 0.88 -1.3 40,275 - -1.0 40,561 + Dshi_4194 0.18 -0.6 40,791 + Dshi_4194 0.32 -0.4
Or see this region's nucleotide sequence