Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4163 and Dshi_4164 overlap by 4 nucleotides Dshi_4164 and Dshi_4165 overlap by 11 nucleotides Dshi_4165 and Dshi_4166 are separated by 96 nucleotides
Dshi_4163: Dshi_4163 - binding-protein-dependent transport systems inner membrane component (RefSeq), at 10,765 to 12,342
_4163
Dshi_4164: Dshi_4164 - ABC transporter related (RefSeq), at 12,339 to 13,145
_4164
Dshi_4165: Dshi_4165 - NMT1/THI5 like domain protein (RefSeq), at 13,135 to 14,130
_4165
Dshi_4166: Dshi_4166 - hypothetical protein (RefSeq), at 14,227 to 15,177
_4166
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 12.399 kb on - strand at 12.488 kb on + strand, within Dshi_4164 at 12.536 kb on - strand, within Dshi_4164 at 12.845 kb on + strand, within Dshi_4164 at 12.955 kb on - strand, within Dshi_4164 at 13.142 kb on + strand at 13.142 kb on + strand at 13.150 kb on - strand at 13.272 kb on + strand, within Dshi_4165 at 13.272 kb on + strand, within Dshi_4165 at 13.525 kb on + strand, within Dshi_4165 at 13.611 kb on + strand, within Dshi_4165 at 13.619 kb on - strand, within Dshi_4165 at 13.658 kb on - strand, within Dshi_4165 at 13.659 kb on + strand, within Dshi_4165 at 13.701 kb on + strand, within Dshi_4165 at 13.916 kb on + strand, within Dshi_4165 at 14.188 kb on - strand at 14.316 kb on - strand at 14.524 kb on + strand, within Dshi_4166 at 14.744 kb on + strand, within Dshi_4166 at 14.907 kb on - strand, within Dshi_4166
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 12,399 - +0.0 12,488 + Dshi_4164 0.18 +1.1 12,536 - Dshi_4164 0.24 -1.2 12,845 + Dshi_4164 0.63 -0.5 12,955 - Dshi_4164 0.76 -1.3 13,142 + +0.8 13,142 + -0.8 13,150 - -3.4 13,272 + Dshi_4165 0.14 +0.2 13,272 + Dshi_4165 0.14 -0.6 13,525 + Dshi_4165 0.39 +0.0 13,611 + Dshi_4165 0.48 +0.5 13,619 - Dshi_4165 0.49 +1.4 13,658 - Dshi_4165 0.53 +1.8 13,659 + Dshi_4165 0.53 -2.2 13,701 + Dshi_4165 0.57 +0.4 13,916 + Dshi_4165 0.78 -0.2 14,188 - +0.3 14,316 - -1.8 14,524 + Dshi_4166 0.31 -1.6 14,744 + Dshi_4166 0.54 +0.2 14,907 - Dshi_4166 0.72 -0.4
Or see this region's nucleotide sequence