Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3372

Experiment: m.b. Cisplatin 0.05 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDshi_3370 and Dshi_3371 are separated by 92 nucleotidesDshi_3371 and Dshi_3372 are separated by 227 nucleotidesDshi_3372 and Dshi_3373 are separated by 21 nucleotides Dshi_3370: Dshi_3370 - Enoyl-CoA hydratase/isomerase (RefSeq), at 3,542,870 to 3,543,646 _3370 Dshi_3371: Dshi_3371 - ribosomal protein S20 (RefSeq), at 3,543,739 to 3,544,005 _3371 Dshi_3372: Dshi_3372 - hypothetical protein (RefSeq), at 3,544,233 to 3,544,682 _3372 Dshi_3373: Dshi_3373 - chromosomal replication initiator protein DnaA (RefSeq), at 3,544,704 to 3,546,086 _3373 Position (kb) 3544 3545Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 3543.655 kb on - strandat 3544.564 kb on + strand, within Dshi_3372

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml
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3,543,655 - -0.7
3,544,564 + Dshi_3372 0.74 -3.9

Or see this region's nucleotide sequence