Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_3292 and Dshi_3293 are separated by 5 nucleotides Dshi_3293 and Dshi_3294 are separated by 12 nucleotides Dshi_3294 and Dshi_3295 are separated by 20 nucleotides Dshi_3295 and Dshi_3296 are separated by 3 nucleotides
Dshi_3292: Dshi_3292 - hypothetical protein (RefSeq), at 3,458,254 to 3,459,135
_3292
Dshi_3293: Dshi_3293 - hypothetical protein (RefSeq), at 3,459,141 to 3,459,959
_3293
Dshi_3294: Dshi_3294 - deoxyxylulose-5-phosphate synthase (RefSeq), at 3,459,972 to 3,461,903
_3294
Dshi_3295: Dshi_3295 - Polyprenyl synthetase (RefSeq), at 3,461,924 to 3,462,799
_3295
Dshi_3296: Dshi_3296 - exodeoxyribonuclease VII, small subunit (RefSeq), at 3,462,803 to 3,463,045
_3296
Position (kb)
3459
3460
3461
3462 Strain fitness (log2 ratio)
-1
0
1
2 at 3459.029 kb on - strand, within Dshi_3292 at 3459.112 kb on - strand at 3459.147 kb on - strand at 3459.170 kb on + strand at 3459.227 kb on + strand, within Dshi_3293 at 3459.321 kb on + strand, within Dshi_3293 at 3459.414 kb on + strand, within Dshi_3293 at 3459.523 kb on - strand, within Dshi_3293 at 3459.555 kb on - strand, within Dshi_3293 at 3459.693 kb on - strand, within Dshi_3293 at 3459.712 kb on + strand, within Dshi_3293 at 3459.755 kb on + strand, within Dshi_3293 at 3459.853 kb on + strand, within Dshi_3293 at 3459.893 kb on + strand at 3460.183 kb on - strand, within Dshi_3294 at 3460.199 kb on + strand, within Dshi_3294 at 3460.434 kb on + strand, within Dshi_3294 at 3460.478 kb on - strand, within Dshi_3294 at 3460.693 kb on - strand, within Dshi_3294 at 3460.753 kb on - strand, within Dshi_3294 at 3460.764 kb on + strand, within Dshi_3294 at 3460.793 kb on + strand, within Dshi_3294 at 3460.927 kb on - strand, within Dshi_3294 at 3460.971 kb on - strand, within Dshi_3294 at 3460.998 kb on - strand, within Dshi_3294 at 3461.087 kb on - strand, within Dshi_3294 at 3461.143 kb on - strand, within Dshi_3294 at 3461.190 kb on - strand, within Dshi_3294 at 3461.266 kb on + strand, within Dshi_3294 at 3461.400 kb on + strand, within Dshi_3294 at 3461.400 kb on + strand, within Dshi_3294 at 3461.514 kb on - strand, within Dshi_3294 at 3461.531 kb on + strand, within Dshi_3294 at 3461.661 kb on + strand, within Dshi_3294 at 3461.701 kb on + strand, within Dshi_3294 at 3461.825 kb on + strand at 3461.833 kb on - strand at 3462.436 kb on + strand, within Dshi_3295 at 3462.836 kb on - strand, within Dshi_3296
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 3,459,029 - Dshi_3292 0.88 -0.0 3,459,112 - +0.2 3,459,147 - -0.5 3,459,170 + +1.2 3,459,227 + Dshi_3293 0.11 +0.4 3,459,321 + Dshi_3293 0.22 -0.8 3,459,414 + Dshi_3293 0.33 +0.3 3,459,523 - Dshi_3293 0.47 -1.2 3,459,555 - Dshi_3293 0.51 -0.2 3,459,693 - Dshi_3293 0.67 +1.0 3,459,712 + Dshi_3293 0.70 +0.0 3,459,755 + Dshi_3293 0.75 -1.0 3,459,853 + Dshi_3293 0.87 +0.8 3,459,893 + +2.1 3,460,183 - Dshi_3294 0.11 -0.6 3,460,199 + Dshi_3294 0.12 +0.1 3,460,434 + Dshi_3294 0.24 +1.0 3,460,478 - Dshi_3294 0.26 +0.1 3,460,693 - Dshi_3294 0.37 +0.4 3,460,753 - Dshi_3294 0.40 -0.2 3,460,764 + Dshi_3294 0.41 +0.8 3,460,793 + Dshi_3294 0.42 -0.2 3,460,927 - Dshi_3294 0.49 -0.6 3,460,971 - Dshi_3294 0.52 +0.1 3,460,998 - Dshi_3294 0.53 +0.1 3,461,087 - Dshi_3294 0.58 -0.6 3,461,143 - Dshi_3294 0.61 +1.6 3,461,190 - Dshi_3294 0.63 +1.8 3,461,266 + Dshi_3294 0.67 +1.5 3,461,400 + Dshi_3294 0.74 +1.0 3,461,400 + Dshi_3294 0.74 -0.1 3,461,514 - Dshi_3294 0.80 -0.5 3,461,531 + Dshi_3294 0.81 +0.1 3,461,661 + Dshi_3294 0.87 +0.4 3,461,701 + Dshi_3294 0.89 +0.6 3,461,825 + +0.1 3,461,833 - +0.1 3,462,436 + Dshi_3295 0.58 -1.1 3,462,836 - Dshi_3296 0.14 -1.2
Or see this region's nucleotide sequence