Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2383 and Dshi_2384 are separated by 9 nucleotides Dshi_2384 and Dshi_2385 are separated by 407 nucleotides Dshi_2385 and Dshi_2386 are separated by 71 nucleotides Dshi_2386 and Dshi_2387 are separated by 166 nucleotides
Dshi_2383: Dshi_2383 - Cytochrome c oxidase subunit I type (RefSeq), at 2,517,133 to 2,518,809
_2383
Dshi_2384: Dshi_2384 - integral membrane protein-like protein (RefSeq), at 2,518,819 to 2,519,340
_2384
Dshi_2385: Dshi_2385 - transcriptional regulator, TraR/DksA family (RefSeq), at 2,519,748 to 2,520,101
_2385
Dshi_2386: Dshi_2386 - GatB/YqeY (RefSeq), at 2,520,173 to 2,520,634
_2386
Dshi_2387: Dshi_2387 - carbamoyl-phosphate synthase, small subunit (RefSeq), at 2,520,801 to 2,521,970
_2387
Position (kb)
2519
2520
2521 Strain fitness (log2 ratio)
-2
-1
0
1 at 2519.245 kb on - strand, within Dshi_2384 at 2519.250 kb on + strand, within Dshi_2384 at 2519.511 kb on + strand at 2519.519 kb on - strand at 2519.519 kb on - strand at 2519.583 kb on - strand at 2519.583 kb on - strand at 2519.867 kb on - strand, within Dshi_2385 at 2520.706 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,519,245 - Dshi_2384 0.82 +1.2 2,519,250 + Dshi_2384 0.83 -1.8 2,519,511 + -1.5 2,519,519 - -0.9 2,519,519 - -0.2 2,519,583 - -0.9 2,519,583 - -0.1 2,519,867 - Dshi_2385 0.34 -0.7 2,520,706 + +0.2
Or see this region's nucleotide sequence