Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2065 and Dshi_2066 are separated by 5 nucleotides Dshi_2066 and Dshi_2067 are separated by 111 nucleotides Dshi_2067 and Dshi_2068 are separated by 185 nucleotides
Dshi_2065: Dshi_2065 - flavin reductase-like, FMN-binding (RefSeq), at 2,186,415 to 2,187,020
_2065
Dshi_2066: Dshi_2066 - hypothetical protein (RefSeq), at 2,187,026 to 2,187,301
_2066
Dshi_2067: Dshi_2067 - sulphate transporter (RefSeq), at 2,187,413 to 2,189,017
_2067
Dshi_2068: Dshi_2068 - methylthioadenosine phosphorylase (RefSeq), at 2,189,203 to 2,190,072
_2068
Position (kb)
2187
2188
2189
2190 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2186.417 kb on - strand at 2186.677 kb on + strand, within Dshi_2065 at 2186.683 kb on - strand, within Dshi_2065 at 2186.714 kb on + strand, within Dshi_2065 at 2187.093 kb on + strand, within Dshi_2066 at 2187.363 kb on + strand at 2187.383 kb on - strand at 2187.445 kb on - strand at 2187.515 kb on - strand at 2187.557 kb on + strand at 2187.651 kb on + strand, within Dshi_2067 at 2187.658 kb on - strand, within Dshi_2067 at 2187.756 kb on + strand, within Dshi_2067 at 2187.783 kb on + strand, within Dshi_2067 at 2187.830 kb on - strand, within Dshi_2067 at 2187.876 kb on + strand, within Dshi_2067 at 2187.884 kb on - strand, within Dshi_2067 at 2188.221 kb on - strand, within Dshi_2067 at 2188.221 kb on - strand, within Dshi_2067 at 2188.221 kb on - strand, within Dshi_2067 at 2188.256 kb on + strand, within Dshi_2067 at 2188.262 kb on + strand, within Dshi_2067 at 2188.463 kb on - strand, within Dshi_2067 at 2188.638 kb on + strand, within Dshi_2067 at 2188.656 kb on - strand, within Dshi_2067 at 2188.737 kb on + strand, within Dshi_2067 at 2188.745 kb on - strand, within Dshi_2067 at 2188.775 kb on - strand, within Dshi_2067 at 2188.788 kb on + strand, within Dshi_2067 at 2188.881 kb on - strand at 2188.886 kb on - strand at 2188.892 kb on + strand at 2189.007 kb on + strand at 2189.025 kb on - strand at 2189.039 kb on + strand at 2189.064 kb on + strand at 2189.074 kb on + strand at 2189.102 kb on + strand at 2189.197 kb on - strand at 2189.231 kb on + strand at 2189.231 kb on + strand at 2189.239 kb on - strand at 2189.239 kb on - strand at 2189.239 kb on - strand at 2189.255 kb on + strand at 2189.255 kb on + strand at 2189.288 kb on + strand at 2189.296 kb on - strand, within Dshi_2068 at 2189.322 kb on - strand, within Dshi_2068 at 2189.348 kb on + strand, within Dshi_2068 at 2189.385 kb on + strand, within Dshi_2068 at 2189.539 kb on - strand, within Dshi_2068 at 2189.572 kb on + strand, within Dshi_2068 at 2189.622 kb on + strand, within Dshi_2068 at 2189.630 kb on - strand, within Dshi_2068 at 2189.810 kb on + strand, within Dshi_2068 at 2189.892 kb on + strand, within Dshi_2068 at 2189.996 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 2,186,417 - -1.5 2,186,677 + Dshi_2065 0.43 -1.3 2,186,683 - Dshi_2065 0.44 -2.1 2,186,714 + Dshi_2065 0.49 +0.3 2,187,093 + Dshi_2066 0.24 +0.1 2,187,363 + -1.1 2,187,383 - -0.8 2,187,445 - +0.3 2,187,515 - -0.3 2,187,557 + -0.0 2,187,651 + Dshi_2067 0.15 +0.9 2,187,658 - Dshi_2067 0.15 -0.7 2,187,756 + Dshi_2067 0.21 +0.1 2,187,783 + Dshi_2067 0.23 -0.3 2,187,830 - Dshi_2067 0.26 -0.7 2,187,876 + Dshi_2067 0.29 +0.2 2,187,884 - Dshi_2067 0.29 +0.6 2,188,221 - Dshi_2067 0.50 +0.2 2,188,221 - Dshi_2067 0.50 +0.1 2,188,221 - Dshi_2067 0.50 -0.7 2,188,256 + Dshi_2067 0.53 -0.3 2,188,262 + Dshi_2067 0.53 -0.7 2,188,463 - Dshi_2067 0.65 -0.9 2,188,638 + Dshi_2067 0.76 -0.1 2,188,656 - Dshi_2067 0.77 +0.1 2,188,737 + Dshi_2067 0.82 +0.3 2,188,745 - Dshi_2067 0.83 -0.7 2,188,775 - Dshi_2067 0.85 -0.8 2,188,788 + Dshi_2067 0.86 -0.1 2,188,881 - +0.0 2,188,886 - -1.3 2,188,892 + +0.1 2,189,007 + +0.4 2,189,025 - -0.2 2,189,039 + -0.6 2,189,064 + +1.3 2,189,074 + +0.5 2,189,102 + -0.8 2,189,197 - +0.4 2,189,231 + -2.9 2,189,231 + +0.0 2,189,239 - -0.5 2,189,239 - -0.2 2,189,239 - +0.1 2,189,255 + +0.2 2,189,255 + -0.9 2,189,288 + -1.9 2,189,296 - Dshi_2068 0.11 +0.7 2,189,322 - Dshi_2068 0.14 -1.3 2,189,348 + Dshi_2068 0.17 -0.5 2,189,385 + Dshi_2068 0.21 +0.9 2,189,539 - Dshi_2068 0.39 +0.3 2,189,572 + Dshi_2068 0.42 -0.0 2,189,622 + Dshi_2068 0.48 -0.3 2,189,630 - Dshi_2068 0.49 +0.9 2,189,810 + Dshi_2068 0.70 -0.5 2,189,892 + Dshi_2068 0.79 -0.6 2,189,996 - -1.9
Or see this region's nucleotide sequence