Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1644 and Dshi_1645 are separated by 73 nucleotides Dshi_1645 and Dshi_1646 are separated by 3 nucleotides
Dshi_1644: Dshi_1644 - integral membrane sensor hybrid histidine kinase (RefSeq), at 1,705,935 to 1,708,274
_1644
Dshi_1645: Dshi_1645 - Fmu (Sun) domain protein (RefSeq), at 1,708,348 to 1,709,526
_1645
Dshi_1646: Dshi_1646 - inosine-5'-monophosphate dehydrogenase (RefSeq), at 1,709,530 to 1,710,984
_1646
Position (kb)
1708
1709
1710 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1707.412 kb on - strand, within Dshi_1644 at 1707.451 kb on + strand, within Dshi_1644 at 1707.477 kb on - strand, within Dshi_1644 at 1707.525 kb on + strand, within Dshi_1644 at 1707.554 kb on + strand, within Dshi_1644 at 1707.648 kb on + strand, within Dshi_1644 at 1707.718 kb on - strand, within Dshi_1644 at 1707.887 kb on + strand, within Dshi_1644 at 1708.045 kb on + strand at 1708.155 kb on - strand at 1708.327 kb on + strand at 1708.335 kb on - strand at 1708.425 kb on - strand at 1708.497 kb on + strand, within Dshi_1645 at 1708.505 kb on - strand, within Dshi_1645 at 1708.585 kb on - strand, within Dshi_1645 at 1708.613 kb on + strand, within Dshi_1645 at 1708.724 kb on - strand, within Dshi_1645 at 1708.869 kb on + strand, within Dshi_1645 at 1708.877 kb on - strand, within Dshi_1645 at 1708.877 kb on - strand, within Dshi_1645 at 1708.937 kb on - strand, within Dshi_1645 at 1709.066 kb on - strand, within Dshi_1645 at 1709.106 kb on - strand, within Dshi_1645 at 1709.116 kb on + strand, within Dshi_1645 at 1709.124 kb on - strand, within Dshi_1645 at 1709.257 kb on - strand, within Dshi_1645 at 1709.396 kb on + strand, within Dshi_1645 at 1709.475 kb on + strand at 1709.484 kb on + strand at 1709.665 kb on + strand at 1709.673 kb on - strand at 1709.721 kb on + strand, within Dshi_1646 at 1710.188 kb on - strand, within Dshi_1646
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,707,412 - Dshi_1644 0.63 -1.5 1,707,451 + Dshi_1644 0.65 -3.0 1,707,477 - Dshi_1644 0.66 -0.5 1,707,525 + Dshi_1644 0.68 -2.9 1,707,554 + Dshi_1644 0.69 +0.1 1,707,648 + Dshi_1644 0.73 -0.3 1,707,718 - Dshi_1644 0.76 -3.1 1,707,887 + Dshi_1644 0.83 -1.2 1,708,045 + -1.2 1,708,155 - -0.9 1,708,327 + -3.1 1,708,335 - -1.9 1,708,425 - -0.7 1,708,497 + Dshi_1645 0.13 -2.7 1,708,505 - Dshi_1645 0.13 -1.9 1,708,585 - Dshi_1645 0.20 -0.5 1,708,613 + Dshi_1645 0.22 -1.9 1,708,724 - Dshi_1645 0.32 +0.4 1,708,869 + Dshi_1645 0.44 -0.9 1,708,877 - Dshi_1645 0.45 -2.2 1,708,877 - Dshi_1645 0.45 -0.5 1,708,937 - Dshi_1645 0.50 +0.5 1,709,066 - Dshi_1645 0.61 -1.8 1,709,106 - Dshi_1645 0.64 -1.2 1,709,116 + Dshi_1645 0.65 -1.1 1,709,124 - Dshi_1645 0.66 -0.4 1,709,257 - Dshi_1645 0.77 -2.3 1,709,396 + Dshi_1645 0.89 -2.0 1,709,475 + -0.5 1,709,484 + -1.0 1,709,665 + -0.5 1,709,673 - -0.1 1,709,721 + Dshi_1646 0.13 -1.5 1,710,188 - Dshi_1646 0.45 -0.5
Or see this region's nucleotide sequence