Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1611 and Dshi_1612 overlap by 4 nucleotides Dshi_1612 and Dshi_1613 are separated by 69 nucleotides Dshi_1613 and Dshi_1614 are separated by 17 nucleotides
Dshi_1611: Dshi_1611 - integrase family protein (RefSeq), at 1,674,956 to 1,675,882
_1611
Dshi_1612: Dshi_1612 - hypothetical protein (RefSeq), at 1,675,879 to 1,676,685
_1612
Dshi_1613: Dshi_1613 - protein of unknown function DUF21 (RefSeq), at 1,676,755 to 1,678,056
_1613
Dshi_1614: Dshi_1614 - protein of unknown function DUF853 NPT hydrolase putative (RefSeq), at 1,678,074 to 1,679,633
_1614
Position (kb)
1676
1677
1678
1679 Strain fitness (log2 ratio)
-2
-1
0
1 at 1675.884 kb on - strand at 1675.970 kb on + strand, within Dshi_1612 at 1675.973 kb on - strand, within Dshi_1612 at 1675.978 kb on - strand, within Dshi_1612 at 1676.036 kb on + strand, within Dshi_1612 at 1676.322 kb on - strand, within Dshi_1612 at 1676.337 kb on + strand, within Dshi_1612 at 1676.492 kb on - strand, within Dshi_1612 at 1676.521 kb on - strand, within Dshi_1612 at 1676.521 kb on - strand, within Dshi_1612 at 1676.538 kb on + strand, within Dshi_1612 at 1676.692 kb on + strand at 1676.692 kb on + strand at 1676.692 kb on + strand at 1676.693 kb on - strand at 1676.693 kb on - strand at 1676.700 kb on - strand at 1676.700 kb on - strand at 1676.732 kb on + strand at 1676.740 kb on + strand at 1676.748 kb on - strand at 1676.906 kb on - strand, within Dshi_1613 at 1678.051 kb on + strand at 1678.424 kb on + strand, within Dshi_1614 at 1678.445 kb on + strand, within Dshi_1614 at 1678.446 kb on - strand, within Dshi_1614 at 1678.508 kb on + strand, within Dshi_1614 at 1678.516 kb on - strand, within Dshi_1614 at 1678.632 kb on - strand, within Dshi_1614 at 1678.694 kb on + strand, within Dshi_1614 at 1678.958 kb on - strand, within Dshi_1614
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,675,884 - +0.3 1,675,970 + Dshi_1612 0.11 -0.8 1,675,973 - Dshi_1612 0.12 +1.1 1,675,978 - Dshi_1612 0.12 -0.9 1,676,036 + Dshi_1612 0.19 +0.5 1,676,322 - Dshi_1612 0.55 -0.9 1,676,337 + Dshi_1612 0.57 +0.1 1,676,492 - Dshi_1612 0.76 -0.2 1,676,521 - Dshi_1612 0.80 +1.1 1,676,521 - Dshi_1612 0.80 -0.8 1,676,538 + Dshi_1612 0.82 -0.6 1,676,692 + -0.9 1,676,692 + -0.8 1,676,692 + +0.6 1,676,693 - -2.2 1,676,693 - -1.7 1,676,700 - -0.0 1,676,700 - -0.3 1,676,732 + +0.6 1,676,740 + -0.8 1,676,748 - +0.6 1,676,906 - Dshi_1613 0.12 -1.5 1,678,051 + +0.1 1,678,424 + Dshi_1614 0.22 +0.4 1,678,445 + Dshi_1614 0.24 -0.4 1,678,446 - Dshi_1614 0.24 +0.1 1,678,508 + Dshi_1614 0.28 +0.1 1,678,516 - Dshi_1614 0.28 +0.8 1,678,632 - Dshi_1614 0.36 -0.1 1,678,694 + Dshi_1614 0.40 +0.9 1,678,958 - Dshi_1614 0.57 -1.0
Or see this region's nucleotide sequence