Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1304 and Dshi_1305 are separated by 139 nucleotides Dshi_1305 and Dshi_1306 are separated by 1 nucleotides Dshi_1306 and Dshi_1307 are separated by 341 nucleotides Dshi_1307 and Dshi_1308 overlap by 10 nucleotides
Dshi_1304: Dshi_1304 - Enoyl-CoA hydratase/isomerase (RefSeq), at 1,358,832 to 1,359,620
_1304
Dshi_1305: Dshi_1305 - 17 kDa surface antigen (RefSeq), at 1,359,760 to 1,359,978
_1305
Dshi_1306: Dshi_1306 - hypothetical protein (RefSeq), at 1,359,980 to 1,360,588
_1306
Dshi_1307: Dshi_1307 - NADH-ubiquinone/plastoquinone oxidoreductase chain 3 (RefSeq), at 1,360,930 to 1,361,295
_1307
Dshi_1308: Dshi_1308 - NADH-quinone oxidoreductase, B subunit (RefSeq), at 1,361,286 to 1,361,819
_1308
Position (kb)
1359
1360
1361 Strain fitness (log2 ratio)
-2
-1
0
1 at 1359.088 kb on - strand, within Dshi_1304 at 1359.308 kb on - strand, within Dshi_1304 at 1359.308 kb on - strand, within Dshi_1304 at 1359.537 kb on - strand at 1359.638 kb on + strand at 1359.658 kb on + strand at 1359.725 kb on - strand at 1359.798 kb on + strand, within Dshi_1305 at 1359.801 kb on - strand, within Dshi_1305 at 1359.811 kb on - strand, within Dshi_1305 at 1360.249 kb on + strand, within Dshi_1306 at 1360.257 kb on - strand, within Dshi_1306 at 1360.262 kb on + strand, within Dshi_1306 at 1360.289 kb on + strand, within Dshi_1306 at 1360.308 kb on - strand, within Dshi_1306 at 1360.332 kb on - strand, within Dshi_1306 at 1360.489 kb on + strand, within Dshi_1306 at 1360.559 kb on - strand at 1360.562 kb on - strand at 1360.634 kb on - strand at 1360.653 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,359,088 - Dshi_1304 0.32 +0.6 1,359,308 - Dshi_1304 0.60 +0.6 1,359,308 - Dshi_1304 0.60 -0.4 1,359,537 - -0.3 1,359,638 + -0.3 1,359,658 + -1.8 1,359,725 - +0.3 1,359,798 + Dshi_1305 0.17 -0.4 1,359,801 - Dshi_1305 0.19 +0.2 1,359,811 - Dshi_1305 0.23 +0.0 1,360,249 + Dshi_1306 0.44 -1.2 1,360,257 - Dshi_1306 0.45 +0.2 1,360,262 + Dshi_1306 0.46 -1.3 1,360,289 + Dshi_1306 0.51 -1.4 1,360,308 - Dshi_1306 0.54 -0.6 1,360,332 - Dshi_1306 0.58 -0.3 1,360,489 + Dshi_1306 0.84 -1.0 1,360,559 - +0.8 1,360,562 - -0.3 1,360,634 - -0.3 1,360,653 - -0.7
Or see this region's nucleotide sequence