Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1252 and Dshi_1253 are separated by 111 nucleotides Dshi_1253 and Dshi_1254 overlap by 4 nucleotides
Dshi_1252: Dshi_1252 - protein of unknown function DUF1045 (RefSeq), at 1,299,255 to 1,299,977
_1252
Dshi_1253: Dshi_1253 - transcriptional regulator, ArsR family (RefSeq), at 1,300,089 to 1,300,952
_1253
Dshi_1254: Dshi_1254 - glyceraldehyde-3-phosphate dehydrogenase, type I (RefSeq), at 1,300,949 to 1,301,971
_1254
Position (kb)
1300
1301 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1299.120 kb on + strand at 1299.120 kb on + strand at 1299.120 kb on + strand at 1299.120 kb on + strand at 1299.120 kb on + strand at 1299.120 kb on + strand at 1299.125 kb on + strand at 1299.133 kb on - strand at 1299.135 kb on + strand at 1299.138 kb on - strand at 1299.140 kb on - strand at 1299.206 kb on - strand at 1299.225 kb on - strand at 1299.251 kb on + strand at 1299.259 kb on - strand at 1299.262 kb on - strand at 1299.287 kb on - strand at 1299.317 kb on + strand at 1299.368 kb on + strand, within Dshi_1252 at 1299.420 kb on + strand, within Dshi_1252 at 1299.424 kb on - strand, within Dshi_1252 at 1299.446 kb on + strand, within Dshi_1252 at 1299.463 kb on + strand, within Dshi_1252 at 1299.540 kb on + strand, within Dshi_1252 at 1299.542 kb on + strand, within Dshi_1252 at 1299.548 kb on - strand, within Dshi_1252 at 1299.548 kb on - strand, within Dshi_1252 at 1299.550 kb on - strand, within Dshi_1252 at 1299.557 kb on - strand, within Dshi_1252 at 1299.612 kb on - strand, within Dshi_1252 at 1299.678 kb on + strand, within Dshi_1252 at 1299.701 kb on + strand, within Dshi_1252 at 1299.709 kb on - strand, within Dshi_1252 at 1299.709 kb on - strand, within Dshi_1252 at 1299.738 kb on - strand, within Dshi_1252 at 1299.742 kb on - strand, within Dshi_1252 at 1299.757 kb on + strand, within Dshi_1252 at 1299.805 kb on - strand, within Dshi_1252 at 1299.917 kb on + strand at 1299.985 kb on - strand at 1299.996 kb on - strand at 1300.142 kb on + strand at 1300.142 kb on + strand at 1300.372 kb on + strand, within Dshi_1253 at 1300.380 kb on - strand, within Dshi_1253 at 1300.380 kb on - strand, within Dshi_1253 at 1300.380 kb on - strand, within Dshi_1253 at 1300.380 kb on - strand, within Dshi_1253 at 1300.380 kb on - strand, within Dshi_1253 at 1300.380 kb on - strand, within Dshi_1253 at 1300.418 kb on + strand, within Dshi_1253 at 1300.441 kb on + strand, within Dshi_1253 at 1300.470 kb on - strand, within Dshi_1253 at 1300.578 kb on - strand, within Dshi_1253 at 1300.587 kb on + strand, within Dshi_1253 at 1300.963 kb on + strand at 1300.963 kb on + strand at 1300.975 kb on - strand at 1301.032 kb on + strand at 1301.144 kb on - strand, within Dshi_1254 at 1301.180 kb on - strand, within Dshi_1254 at 1301.185 kb on + strand, within Dshi_1254 at 1301.185 kb on + strand, within Dshi_1254 at 1301.193 kb on - strand, within Dshi_1254 at 1301.229 kb on + strand, within Dshi_1254 at 1301.236 kb on - strand, within Dshi_1254 at 1301.300 kb on + strand, within Dshi_1254 at 1301.467 kb on + strand, within Dshi_1254 at 1301.620 kb on + strand, within Dshi_1254 at 1301.890 kb on + strand at 1301.892 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 1,299,120 + -0.6 1,299,120 + -1.4 1,299,120 + +0.2 1,299,120 + -2.3 1,299,120 + -0.1 1,299,120 + -0.7 1,299,125 + +0.7 1,299,133 - -0.8 1,299,135 + +0.7 1,299,138 - +0.8 1,299,140 - -0.5 1,299,206 - -0.4 1,299,225 - +1.2 1,299,251 + -0.8 1,299,259 - +1.2 1,299,262 - -1.8 1,299,287 - -0.8 1,299,317 + +0.1 1,299,368 + Dshi_1252 0.16 +0.2 1,299,420 + Dshi_1252 0.23 -0.6 1,299,424 - Dshi_1252 0.23 -0.5 1,299,446 + Dshi_1252 0.26 -0.5 1,299,463 + Dshi_1252 0.29 -0.7 1,299,540 + Dshi_1252 0.39 -0.2 1,299,542 + Dshi_1252 0.40 -1.1 1,299,548 - Dshi_1252 0.41 -0.4 1,299,548 - Dshi_1252 0.41 -0.4 1,299,550 - Dshi_1252 0.41 +0.2 1,299,557 - Dshi_1252 0.42 -0.2 1,299,612 - Dshi_1252 0.49 -0.0 1,299,678 + Dshi_1252 0.59 -1.6 1,299,701 + Dshi_1252 0.62 +0.2 1,299,709 - Dshi_1252 0.63 -0.0 1,299,709 - Dshi_1252 0.63 +2.5 1,299,738 - Dshi_1252 0.67 -1.3 1,299,742 - Dshi_1252 0.67 -1.7 1,299,757 + Dshi_1252 0.69 +0.8 1,299,805 - Dshi_1252 0.76 -0.9 1,299,917 + -1.3 1,299,985 - -0.2 1,299,996 - -0.9 1,300,142 + -0.4 1,300,142 + -0.8 1,300,372 + Dshi_1253 0.33 +2.5 1,300,380 - Dshi_1253 0.34 +0.8 1,300,380 - Dshi_1253 0.34 +0.4 1,300,380 - Dshi_1253 0.34 -0.0 1,300,380 - Dshi_1253 0.34 -0.6 1,300,380 - Dshi_1253 0.34 +0.6 1,300,380 - Dshi_1253 0.34 -1.9 1,300,418 + Dshi_1253 0.38 -1.7 1,300,441 + Dshi_1253 0.41 -0.5 1,300,470 - Dshi_1253 0.44 +0.9 1,300,578 - Dshi_1253 0.57 +0.3 1,300,587 + Dshi_1253 0.58 +0.5 1,300,963 + -1.2 1,300,963 + +0.3 1,300,975 - -2.0 1,301,032 + -0.6 1,301,144 - Dshi_1254 0.19 -0.5 1,301,180 - Dshi_1254 0.23 -0.0 1,301,185 + Dshi_1254 0.23 -0.5 1,301,185 + Dshi_1254 0.23 -1.2 1,301,193 - Dshi_1254 0.24 +1.3 1,301,229 + Dshi_1254 0.27 -2.4 1,301,236 - Dshi_1254 0.28 -1.0 1,301,300 + Dshi_1254 0.34 -0.6 1,301,467 + Dshi_1254 0.51 -1.4 1,301,620 + Dshi_1254 0.66 -0.5 1,301,890 + +1.2 1,301,892 - -0.1
Or see this region's nucleotide sequence