Experiment: m.b. Cisplatin 0.05 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0723 and Dshi_0724 are separated by 64 nucleotides Dshi_0724 and Dshi_0725 are separated by 108 nucleotides Dshi_0725 and Dshi_0726 overlap by 29 nucleotides
Dshi_0723: Dshi_0723 - Propionyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.3) <small>(from data)</small>, at 729,769 to 731,814
_0723
Dshi_0724: Dshi_0724 - hypothetical protein (RefSeq), at 731,879 to 732,328
_0724
Dshi_0725: Dshi_0725 - hypothetical protein (RefSeq), at 732,437 to 733,432
_0725
Dshi_0726: Dshi_0726 - methylmalonyl-CoA mutase, large subunit (RefSeq), at 733,404 to 735,542
_0726
Position (kb) 732
733
734 Strain fitness (log2 ratio) -2
-1
0
1
2 at 731.936 kb on + strand, within Dshi_0724 at 732.090 kb on + strand, within Dshi_0724 at 732.167 kb on - strand, within Dshi_0724 at 732.176 kb on + strand, within Dshi_0724 at 732.176 kb on + strand, within Dshi_0724 at 732.176 kb on + strand, within Dshi_0724 at 732.176 kb on + strand, within Dshi_0724 at 732.176 kb on + strand, within Dshi_0724 at 732.176 kb on + strand, within Dshi_0724 at 732.184 kb on - strand, within Dshi_0724 at 732.184 kb on - strand, within Dshi_0724 at 732.184 kb on - strand, within Dshi_0724 at 732.222 kb on - strand, within Dshi_0724 at 732.248 kb on - strand, within Dshi_0724 at 732.330 kb on - strand at 732.432 kb on - strand at 732.440 kb on - strand at 732.451 kb on + strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.459 kb on - strand at 732.570 kb on + strand, within Dshi_0725 at 732.622 kb on - strand, within Dshi_0725 at 732.688 kb on + strand, within Dshi_0725 at 732.738 kb on + strand, within Dshi_0725 at 732.788 kb on + strand, within Dshi_0725 at 732.814 kb on + strand, within Dshi_0725 at 732.892 kb on - strand, within Dshi_0725 at 732.930 kb on + strand, within Dshi_0725 at 733.091 kb on + strand, within Dshi_0725 at 733.260 kb on + strand, within Dshi_0725 at 733.364 kb on - strand at 733.383 kb on - strand at 733.403 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.05 mg/ml remove 731,936 + Dshi_0724 0.13 +0.1 732,090 + Dshi_0724 0.47 +2.4 732,167 - Dshi_0724 0.64 +0.2 732,176 + Dshi_0724 0.66 -2.5 732,176 + Dshi_0724 0.66 -0.9 732,176 + Dshi_0724 0.66 +2.1 732,176 + Dshi_0724 0.66 +0.3 732,176 + Dshi_0724 0.66 -0.3 732,176 + Dshi_0724 0.66 +0.4 732,184 - Dshi_0724 0.68 +1.4 732,184 - Dshi_0724 0.68 -0.4 732,184 - Dshi_0724 0.68 +0.4 732,222 - Dshi_0724 0.76 -0.5 732,248 - Dshi_0724 0.82 +0.2 732,330 - +0.7 732,432 - -0.4 732,440 - +0.1 732,451 + -0.1 732,459 - -0.5 732,459 - +0.4 732,459 - -0.6 732,459 - -0.5 732,459 - +0.1 732,570 + Dshi_0725 0.13 +1.6 732,622 - Dshi_0725 0.19 +1.1 732,688 + Dshi_0725 0.25 +1.5 732,738 + Dshi_0725 0.30 +1.2 732,788 + Dshi_0725 0.35 -0.7 732,814 + Dshi_0725 0.38 +0.1 732,892 - Dshi_0725 0.46 -0.6 732,930 + Dshi_0725 0.49 +0.2 733,091 + Dshi_0725 0.66 -0.2 733,260 + Dshi_0725 0.83 +0.3 733,364 - -0.2 733,383 - +0.2 733,403 - +0.7
Or see this region's nucleotide sequence