Strain Fitness in Rhodanobacter denitrificans FW104-10B01 around LRK54_RS09925

Experiment: R2A control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A control
2,180,233	+		LRK54_RS09920	0.24	+0.1
2,180,233	+		LRK54_RS09920	0.24	+0.5
2,180,233	+		LRK54_RS09920	0.24	-0.3
2,180,233	+		LRK54_RS09920	0.24	+0.7
2,180,233	+		LRK54_RS09920	0.24	-0.0
2,180,233	+		LRK54_RS09920	0.24	-0.6
2,180,233	+		LRK54_RS09920	0.24	-0.1
2,180,233	+		LRK54_RS09920	0.24	-0.1
2,180,233	+		LRK54_RS09920	0.24	+0.6
2,180,233	+		LRK54_RS09920	0.24	-0.9
2,180,233	+		LRK54_RS09920	0.24	-0.4
2,180,233	+		LRK54_RS09920	0.24	+1.1
2,180,233	+		LRK54_RS09920	0.24	-0.5
2,180,234	-		LRK54_RS09920	0.24	+0.2
2,180,234	-		LRK54_RS09920	0.24	-0.8
2,180,234	-		LRK54_RS09920	0.24	+0.1
2,180,234	-		LRK54_RS09920	0.24	-1.2
2,180,234	-		LRK54_RS09920	0.24	-0.1
2,180,234	-		LRK54_RS09920	0.24	+0.1
2,180,234	-		LRK54_RS09920	0.24	-0.6
2,180,234	-		LRK54_RS09920	0.24	-0.2
2,180,290	+		LRK54_RS09920	0.30	-1.1
2,180,290	+		LRK54_RS09920	0.30	-0.6
2,180,291	-		LRK54_RS09920	0.30	-0.3
2,180,291	-		LRK54_RS09920	0.30	-0.1
2,180,291	-		LRK54_RS09920	0.30	-0.4
2,180,291	-		LRK54_RS09920	0.30	+0.6
2,180,291	-		LRK54_RS09920	0.30	-1.6
2,180,323	+		LRK54_RS09920	0.33	-0.5
2,180,323	+		LRK54_RS09920	0.33	-0.2
2,180,323	+		LRK54_RS09920	0.33	-0.7
2,180,323	+		LRK54_RS09920	0.33	+0.6
2,180,323	+		LRK54_RS09920	0.33	-0.0
2,180,323	+		LRK54_RS09920	0.33	+0.1
2,180,323	+		LRK54_RS09920	0.33	+0.4
2,180,323	+		LRK54_RS09920	0.33	+0.9
2,180,324	-		LRK54_RS09920	0.34	+0.3
2,180,324	-		LRK54_RS09920	0.34	-0.1
2,180,324	-		LRK54_RS09920	0.34	-0.1
2,180,324	-		LRK54_RS09920	0.34	-0.3
2,180,324	-		LRK54_RS09920	0.34	-1.5
2,180,324	-		LRK54_RS09920	0.34	-0.1
2,180,324	-		LRK54_RS09920	0.34	+2.1
2,180,324	-		LRK54_RS09920	0.34	-0.6
2,180,324	-		LRK54_RS09920	0.34	+0.1
2,180,324	-		LRK54_RS09920	0.34	-0.8
2,180,324	-		LRK54_RS09920	0.34	+0.1
2,180,324	-		LRK54_RS09920	0.34	-0.1
2,180,324	-		LRK54_RS09920	0.34	-0.8
2,180,324	-		LRK54_RS09920	0.34	+1.7
2,180,324	-		LRK54_RS09920	0.34	+0.7
2,180,324	-		LRK54_RS09920	0.34	+0.1
2,180,324	-		LRK54_RS09920	0.34	-1.1
2,180,326	+		LRK54_RS09920	0.34	-0.5
2,180,326	+		LRK54_RS09920	0.34	-0.3
2,180,326	+		LRK54_RS09920	0.34	-0.5
2,180,326	+		LRK54_RS09920	0.34	+0.2
2,180,326	+		LRK54_RS09920	0.34	+0.8
2,180,326	+		LRK54_RS09920	0.34	-0.9
2,180,326	+		LRK54_RS09920	0.34	+0.1
2,180,326	+		LRK54_RS09920	0.34	-0.2
2,180,326	+		LRK54_RS09920	0.34	-0.4
2,180,326	+		LRK54_RS09920	0.34	-0.3
2,180,326	+		LRK54_RS09920	0.34	-0.1
2,180,326	+		LRK54_RS09920	0.34	+0.9
2,180,326	+		LRK54_RS09920	0.34	-1.3
2,180,326	+		LRK54_RS09920	0.34	-0.8
2,180,327	-		LRK54_RS09920	0.34	+0.5
2,180,327	-		LRK54_RS09920	0.34	-0.3
2,180,327	-		LRK54_RS09920	0.34	+0.1
2,180,327	-		LRK54_RS09920	0.34	-0.9
2,180,327	-		LRK54_RS09920	0.34	-0.1
2,180,327	-		LRK54_RS09920	0.34	+1.4
2,180,327	-		LRK54_RS09920	0.34	+0.8
2,180,327	-		LRK54_RS09920	0.34	+0.5
2,180,327	-		LRK54_RS09920	0.34	-0.4
2,180,327	-		LRK54_RS09920	0.34	+1.4
2,180,381	-		LRK54_RS09920	0.40	+3.5
2,180,381	-		LRK54_RS09920	0.40	+0.5
2,180,404	+		LRK54_RS09920	0.42	+0.4
2,180,404	+		LRK54_RS09920	0.42	+0.7
2,180,404	+		LRK54_RS09920	0.42	-0.9
2,180,404	+		LRK54_RS09920	0.42	-0.9
2,180,404	+		LRK54_RS09920	0.42	+0.8
2,180,404	+		LRK54_RS09920	0.42	-0.6
2,180,404	+		LRK54_RS09920	0.42	-0.7
2,180,404	+		LRK54_RS09920	0.42	-0.7
2,180,404	+		LRK54_RS09920	0.42	+0.7
2,180,404	+		LRK54_RS09920	0.42	+0.6
2,180,404	+		LRK54_RS09920	0.42	-0.6
2,180,404	+		LRK54_RS09920	0.42	+2.7
2,180,404	+		LRK54_RS09920	0.42	+0.2
2,180,404	+		LRK54_RS09920	0.42	+0.3
2,180,404	+		LRK54_RS09920	0.42	-0.1
2,180,404	+		LRK54_RS09920	0.42	-0.6
2,180,405	-		LRK54_RS09920	0.42	-0.5
2,180,405	-		LRK54_RS09920	0.42	-0.5
2,180,405	-		LRK54_RS09920	0.42	+0.4
2,180,405	-		LRK54_RS09920	0.42	-0.0
2,180,405	-		LRK54_RS09920	0.42	-0.5
2,180,405	-		LRK54_RS09920	0.42	+0.7
2,180,405	-		LRK54_RS09920	0.42	-0.1
2,180,405	-		LRK54_RS09920	0.42	+0.1
2,180,405	-		LRK54_RS09920	0.42	+0.1
2,180,405	-		LRK54_RS09920	0.42	+1.0
2,180,405	-		LRK54_RS09920	0.42	+1.2
2,180,405	-		LRK54_RS09920	0.42	+1.3
2,180,405	-		LRK54_RS09920	0.42	+0.5
2,180,405	-		LRK54_RS09920	0.42	-0.4
2,180,405	-		LRK54_RS09920	0.42	-0.1
2,180,405	-		LRK54_RS09920	0.42	-1.3
2,180,425	+		LRK54_RS09920	0.44	-0.0
2,180,426	-		LRK54_RS09920	0.44	+0.2
2,180,562	+		LRK54_RS09920	0.59	-0.3
2,180,562	+		LRK54_RS09920	0.59	-0.3
2,180,562	+		LRK54_RS09920	0.59	+0.9
2,180,590	+		LRK54_RS09920	0.62	-0.4
2,180,590	+		LRK54_RS09920	0.62	-0.3
2,180,590	+		LRK54_RS09920	0.62	-0.3
2,180,590	+		LRK54_RS09920	0.62	+0.2
2,180,590	+		LRK54_RS09920	0.62	+0.0
2,180,591	-		LRK54_RS09920	0.62	-1.2
2,180,591	-		LRK54_RS09920	0.62	+0.3
2,180,591	-		LRK54_RS09920	0.62	+0.3
2,180,591	-		LRK54_RS09920	0.62	+0.6
2,180,591	-		LRK54_RS09920	0.62	+0.0
2,180,591	-		LRK54_RS09920	0.62	+1.9
2,180,591	-		LRK54_RS09920	0.62	-0.0
2,180,794	+		LRK54_RS09920	0.83	-2.1
2,180,794	+		LRK54_RS09920	0.83	-0.9
2,180,794	+		LRK54_RS09920	0.83	+0.3
2,180,794	+		LRK54_RS09920	0.83	-1.5
2,180,795	-		LRK54_RS09920	0.83	-0.2
2,180,795	-		LRK54_RS09920	0.83	+0.9
2,180,795	-		LRK54_RS09920	0.83	+0.3
2,180,795	-		LRK54_RS09920	0.83	-1.1
2,180,795	-		LRK54_RS09920	0.83	+0.2
2,180,915	+				-0.1
2,180,915	+				+0.6
2,180,915	+				-1.6
2,180,916	-				-0.6
2,180,916	-				+0.3
2,180,916	-				-0.8
2,180,916	-				+0.2
2,181,027	+				-0.1
2,181,027	+				+0.7
2,181,027	+				-0.0
2,181,028	-				-0.6
2,181,299	+				-0.1
2,181,299	+				+0.7
2,181,299	+				-0.1
2,181,300	-				-2.1
2,181,300	-				+0.2
2,181,300	-				+0.2
2,181,329	-				-0.5
2,181,329	-				-0.3
2,181,329	-				-0.5
2,181,330	+				+0.7
2,181,330	+				-1.7
2,181,330	+				-2.0
2,181,330	+				-0.6
2,181,330	+				-0.4
2,181,330	+				+0.2
2,181,331	-				+0.3
2,181,331	-				-0.3
2,181,331	-				-2.4
2,181,331	-				-2.0
2,181,331	-				-0.0
2,181,331	-				+1.1
2,181,331	-				-1.3
2,181,331	-				-0.2
2,181,331	-				-0.4
2,181,331	-				+1.3
2,181,331	-				-1.3
2,181,331	-				-1.0
2,181,331	-				+0.4
2,181,331	-				-0.9
2,181,791	+		LRK54_RS09930	0.47	-0.1
2,181,791	+		LRK54_RS09930	0.47	-0.9
2,181,995	+		LRK54_RS09930	0.69	+0.1
2,181,995	+		LRK54_RS09930	0.69	+0.1
2,181,995	+		LRK54_RS09930	0.69	-0.6
2,181,995	+		LRK54_RS09930	0.69	-0.4
2,181,995	+		LRK54_RS09930	0.69	-0.8
2,181,995	+		LRK54_RS09930	0.69	-1.7
2,181,995	+		LRK54_RS09930	0.69	-0.5
2,181,995	+		LRK54_RS09930	0.69	+0.1
2,181,995	+		LRK54_RS09930	0.69	-1.1
2,181,995	+		LRK54_RS09930	0.69	-1.0
2,181,995	+		LRK54_RS09930	0.69	+0.4
2,181,995	+		LRK54_RS09930	0.69	-0.6
2,181,995	+		LRK54_RS09930	0.69	-0.3
2,181,995	+		LRK54_RS09930	0.69	-0.2
2,181,996	-		LRK54_RS09930	0.69	-1.6
2,181,996	-		LRK54_RS09930	0.69	+0.1
2,181,996	-		LRK54_RS09930	0.69	-0.3
2,181,996	-		LRK54_RS09930	0.69	-0.4
2,181,996	-		LRK54_RS09930	0.69	-1.0
2,181,996	-		LRK54_RS09930	0.69	-0.3
2,181,996	-		LRK54_RS09930	0.69	+0.7
2,181,996	-		LRK54_RS09930	0.69	-1.0
2,181,996	-		LRK54_RS09930	0.69	+2.7
2,181,996	-		LRK54_RS09930	0.69	-0.1
2,181,996	-		LRK54_RS09930	0.69	-1.4
2,181,996	-		LRK54_RS09930	0.69	+0.9
2,181,996	-		LRK54_RS09930	0.69	-0.6
2,181,996	-		LRK54_RS09930	0.69	-0.6
2,181,996	-		LRK54_RS09930	0.69	-0.6
2,181,996	-		LRK54_RS09930	0.69	-1.8
2,181,996	-		LRK54_RS09930	0.69	+0.5
2,181,996	-		LRK54_RS09930	0.69	-0.5
2,181,996	-		LRK54_RS09930	0.69	+0.7
2,181,996	-		LRK54_RS09930	0.69	-0.9
2,181,996	-		LRK54_RS09930	0.69	-1.8
2,181,996	-		LRK54_RS09930	0.69	+0.2
2,181,996	-		LRK54_RS09930	0.69	-0.9
2,182,127	+		LRK54_RS09930	0.83	-0.2
2,182,127	+		LRK54_RS09930	0.83	+0.8
2,182,127	+		LRK54_RS09930	0.83	+0.2
2,182,127	+		LRK54_RS09930	0.83	-0.7
2,182,127	+		LRK54_RS09930	0.83	-0.9
2,182,127	+		LRK54_RS09930	0.83	-1.6
2,182,127	+		LRK54_RS09930	0.83	+0.7
2,182,127	+		LRK54_RS09930	0.83	-1.1
2,182,127	+		LRK54_RS09930	0.83	-3.6
2,182,127	+		LRK54_RS09930	0.83	-1.2
2,182,127	+		LRK54_RS09930	0.83	+0.1
2,182,127	+		LRK54_RS09930	0.83	-1.0
2,182,127	+		LRK54_RS09930	0.83	+0.3
2,182,127	+		LRK54_RS09930	0.83	-0.6
2,182,127	+		LRK54_RS09930	0.83	-0.2
2,182,127	+		LRK54_RS09930	0.83	-2.2
2,182,127	+		LRK54_RS09930	0.83	+0.1
2,182,127	+		LRK54_RS09930	0.83	-1.9
2,182,127	+		LRK54_RS09930	0.83	-0.4
2,182,127	+		LRK54_RS09930	0.83	+0.4
2,182,128	-		LRK54_RS09930	0.83	-1.3
2,182,128	-		LRK54_RS09930	0.83	+0.3
2,182,128	-		LRK54_RS09930	0.83	-0.3
2,182,128	-		LRK54_RS09930	0.83	+0.7
2,182,128	-		LRK54_RS09930	0.83	-0.8
2,182,128	-		LRK54_RS09930	0.83	-0.3
2,182,128	-		LRK54_RS09930	0.83	-1.9
2,182,128	-		LRK54_RS09930	0.83	+0.4
2,182,128	-		LRK54_RS09930	0.83	-0.3
2,182,128	-		LRK54_RS09930	0.83	-0.9
2,182,128	-		LRK54_RS09930	0.83	-1.8
2,182,128	-		LRK54_RS09930	0.83	+0.1
2,182,128	-		LRK54_RS09930	0.83	-1.6
2,182,128	-		LRK54_RS09930	0.83	-0.9
2,182,128	-		LRK54_RS09930	0.83	-1.5
2,182,128	-		LRK54_RS09930	0.83	-1.1
2,182,128	-		LRK54_RS09930	0.83	-1.1
2,182,128	-		LRK54_RS09930	0.83	+0.4
2,182,128	-		LRK54_RS09930	0.83	-0.6
2,182,128	-		LRK54_RS09930	0.83	+0.4
2,182,128	-		LRK54_RS09930	0.83	-0.9
2,182,128	-		LRK54_RS09930	0.83	-1.8
2,182,128	-		LRK54_RS09930	0.83	-0.1
2,182,128	-		LRK54_RS09930	0.83	+0.1
2,182,128	-		LRK54_RS09930	0.83	+0.1
2,182,128	-		LRK54_RS09930	0.83	+0.8
2,182,128	-		LRK54_RS09930	0.83	-0.6
2,182,128	-		LRK54_RS09930	0.83	-2.0
2,182,128	-		LRK54_RS09930	0.83	+2.7
2,182,128	-		LRK54_RS09930	0.83	+1.7
2,182,128	-		LRK54_RS09930	0.83	-0.3
2,182,128	-		LRK54_RS09930	0.83	-0.1
2,182,128	-		LRK54_RS09930	0.83	-0.6
2,182,148	+		LRK54_RS09930	0.85	-2.4
2,182,148	+		LRK54_RS09930	0.85	-0.6
2,182,148	+		LRK54_RS09930	0.85	-1.1
2,182,149	-		LRK54_RS09930	0.85	-0.9
2,182,149	-		LRK54_RS09930	0.85	-1.9
2,182,149	-		LRK54_RS09930	0.85	-1.6
2,182,149	-		LRK54_RS09930	0.85	-0.3
2,182,149	-		LRK54_RS09930	0.85	-1.6
2,182,149	-		LRK54_RS09930	0.85	+0.4
2,182,149	-		LRK54_RS09930	0.85	+0.7
2,182,160	+		LRK54_RS09930	0.87	-1.4
2,182,160	+		LRK54_RS09930	0.87	-0.9
2,182,160	+		LRK54_RS09930	0.87	+0.1
2,182,160	+		LRK54_RS09930	0.87	+0.4
2,182,161	-		LRK54_RS09930	0.87	-2.2
2,182,161	-		LRK54_RS09930	0.87	+0.0
2,182,161	-		LRK54_RS09930	0.87	+0.5
2,182,161	-		LRK54_RS09930	0.87	-2.3
2,182,232	+				-1.2