Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3926

Experiment: 5-Hydroxymethylfurfural 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 1 mM
4,039,634	-				+0.5
4,039,634	-				-0.5
4,039,718	+				-0.6
4,039,718	+				-0.6
4,039,718	+				-0.5
4,039,718	+				+0.1
4,039,719	-				-0.4
4,039,719	-				-0.1
4,039,719	-				+1.1
4,039,719	-				-0.4
4,039,719	-				-0.9
4,039,752	+				-0.1
4,039,752	+				-0.8
4,039,752	+				-0.8
4,039,752	+				+0.6
4,039,753	-				+0.3
4,039,774	-				-0.7
4,039,958	+				+0.7
4,039,958	+				+1.2
4,039,958	+				-0.1
4,039,959	-				-0.7
4,039,959	-				-0.3
4,039,959	-				-0.3
4,039,959	-				-0.2
4,039,991	+				+0.1
4,039,991	+				-0.7
4,039,991	+				-0.4
4,039,991	+				-1.2
4,039,991	+				+0.6
4,039,991	+				+0.5
4,039,992	-				-0.7
4,039,992	-				+0.2
4,039,992	-				-0.9
4,039,992	-				+0.1
4,039,992	-				-0.3
4,039,992	-				+0.2
4,039,992	-				-0.7
4,039,992	-				+0.5
4,039,992	-				+0.2
4,039,992	-				+0.4
4,040,018	-				+0.6
4,040,018	-				+0.2
4,040,018	-				+0.6
4,040,158	+		Ga0059261_3925	0.25	-3.7
4,040,158	+		Ga0059261_3925	0.25	-0.1
4,040,159	-		Ga0059261_3925	0.25	-0.3
4,040,159	-		Ga0059261_3925	0.25	-0.9
4,040,159	-				-1.4
4,040,159	-		Ga0059261_3925	0.25	-1.3
4,040,159	-		Ga0059261_3925	0.25	-1.3
4,040,211	+		Ga0059261_3925	0.34	-0.6
4,040,212	-		Ga0059261_3925	0.34	+0.9
4,040,232	+		Ga0059261_3925	0.37	+1.3
4,040,279	+		Ga0059261_3925	0.45	-1.7
4,040,848	+				-0.1
4,040,848	+				+0.1
4,040,848	+				-0.5
4,040,848	+				-0.4
4,040,849	-				-2.2
4,040,849	-				+0.0
4,040,849	-				-0.1
4,040,849	-				-0.4
4,041,229	+		Ga0059261_3926	0.17	+0.3
4,041,229	+		Ga0059261_3926	0.17	-0.4
4,041,230	-		Ga0059261_3926	0.17	-0.2
4,041,230	-		Ga0059261_3926	0.17	-0.6
4,041,235	+		Ga0059261_3926	0.17	-0.2
4,041,235	+		Ga0059261_3926	0.17	+0.2
4,041,283	+		Ga0059261_3926	0.18	-1.0
4,041,395	-		Ga0059261_3926	0.22	-1.9
4,041,395	-		Ga0059261_3926	0.22	-1.1
4,041,395	-		Ga0059261_3926	0.22	-0.1
4,041,472	+		Ga0059261_3926	0.24	+0.8
4,041,472	+		Ga0059261_3926	0.24	-1.7
4,041,472	+		Ga0059261_3926	0.24	-1.4
4,041,472	+		Ga0059261_3926	0.24	+0.2
4,041,473	-		Ga0059261_3926	0.24	+0.0
4,041,473	-		Ga0059261_3926	0.24	+0.0
4,041,601	+		Ga0059261_3926	0.27	-1.2
4,041,601	+		Ga0059261_3926	0.27	+0.1
4,041,602	-		Ga0059261_3926	0.27	-0.2
4,041,602	-		Ga0059261_3926	0.27	-2.2
4,041,694	+		Ga0059261_3926	0.30	-0.3
4,041,695	-		Ga0059261_3926	0.30	+0.1
4,041,695	-		Ga0059261_3926	0.30	-0.5
4,041,751	+		Ga0059261_3926	0.32	-0.4
4,041,751	+		Ga0059261_3926	0.32	+0.9
4,041,751	+		Ga0059261_3926	0.32	-0.4
4,041,752	-		Ga0059261_3926	0.32	-1.4
4,041,766	+		Ga0059261_3926	0.32	-0.7
4,041,766	+		Ga0059261_3926	0.32	+0.1
4,041,767	-		Ga0059261_3926	0.32	-0.5
4,041,781	+		Ga0059261_3926	0.32	-0.4
4,041,781	+		Ga0059261_3926	0.32	+0.2
4,041,781	+		Ga0059261_3926	0.32	+0.2
4,041,781	+		Ga0059261_3926	0.32	+0.6
4,041,782	-		Ga0059261_3926	0.32	-0.4
4,041,782	-		Ga0059261_3926	0.32	-0.6
4,041,782	-		Ga0059261_3926	0.32	-0.6
4,041,846	+		Ga0059261_3926	0.34	-0.4
4,041,846	+		Ga0059261_3926	0.34	-1.2
4,041,847	-		Ga0059261_3926	0.34	-0.2
4,041,847	-		Ga0059261_3926	0.34	-0.6
4,041,872	-		Ga0059261_3926	0.35	-1.7
4,041,916	-		Ga0059261_3926	0.36	+0.3
4,041,946	+		Ga0059261_3926	0.37	-0.2
4,041,946	+		Ga0059261_3926	0.37	-0.2
4,041,947	-		Ga0059261_3926	0.37	-0.7
4,041,947	-		Ga0059261_3926	0.37	+1.1
4,041,994	+		Ga0059261_3926	0.38	-0.5
4,041,994	+		Ga0059261_3926	0.38	-0.4
4,041,994	+		Ga0059261_3926	0.38	+0.2
4,041,994	+		Ga0059261_3926	0.38	+0.6
4,041,994	+		Ga0059261_3926	0.38	+0.2
4,041,994	+		Ga0059261_3926	0.38	-0.5
4,041,994	+		Ga0059261_3926	0.38	+0.1
4,041,994	+		Ga0059261_3926	0.38	-0.5
4,041,994	+		Ga0059261_3926	0.38	-0.0
4,041,995	-		Ga0059261_3926	0.38	-0.9
4,041,995	-		Ga0059261_3926	0.38	-0.8
4,041,995	-		Ga0059261_3926	0.38	-1.2
4,041,995	-				+1.0
4,042,030	+		Ga0059261_3926	0.39	-1.1
4,042,031	-		Ga0059261_3926	0.39	-0.2
4,042,198	+		Ga0059261_3926	0.44	-0.4
4,042,199	-		Ga0059261_3926	0.44	-1.3
4,042,199	-		Ga0059261_3926	0.44	-0.7
4,042,339	+		Ga0059261_3926	0.48	+0.3
4,042,494	+		Ga0059261_3926	0.52	-0.7
4,042,496	+		Ga0059261_3926	0.52	-0.5
4,042,535	+		Ga0059261_3926	0.53	-0.2
4,042,536	-		Ga0059261_3926	0.53	-0.1
4,042,536	-		Ga0059261_3926	0.53	+0.0
4,042,536	-		Ga0059261_3926	0.53	-0.2
4,042,603	+		Ga0059261_3926	0.55	+0.1
4,042,603	+		Ga0059261_3926	0.55	-1.2
4,042,603	+		Ga0059261_3926	0.55	+0.6
4,042,604	-		Ga0059261_3926	0.55	-1.8
4,042,604	-		Ga0059261_3926	0.55	-0.2
4,042,604	-				+1.2
4,042,604	-		Ga0059261_3926	0.55	-0.9
4,042,606	+				+0.1
4,042,606	+		Ga0059261_3926	0.55	+0.3
4,042,606	+		Ga0059261_3926	0.55	-0.8
4,042,606	+				-0.4
4,042,606	+		Ga0059261_3926	0.55	-0.5
4,042,607	-		Ga0059261_3926	0.55	-0.4
4,042,607	-		Ga0059261_3926	0.55	-1.1
4,043,139	+		Ga0059261_3926	0.70	+0.4
4,043,140	-		Ga0059261_3926	0.70	-0.3
4,043,140	-		Ga0059261_3926	0.70	-0.6
4,043,244	+		Ga0059261_3926	0.73	-0.4
4,043,256	+		Ga0059261_3926	0.73	-0.4
4,043,256	+		Ga0059261_3926	0.73	-1.2
4,043,256	+				+0.2
4,043,257	-		Ga0059261_3926	0.73	-0.7
4,043,257	-		Ga0059261_3926	0.73	-0.2
4,043,257	-		Ga0059261_3926	0.73	-0.6
4,043,257	-		Ga0059261_3926	0.73	-0.8
4,043,413	+		Ga0059261_3926	0.78	-0.3
4,043,413	+		Ga0059261_3926	0.78	-1.2
4,043,413	+				+0.6
4,043,413	+		Ga0059261_3926	0.78	-0.6
4,043,414	-		Ga0059261_3926	0.78	-0.1
4,043,414	-		Ga0059261_3926	0.78	-0.5
4,043,546	-		Ga0059261_3926	0.81	-0.3
4,043,546	-		Ga0059261_3926	0.81	-0.0
4,043,546	-		Ga0059261_3926	0.81	-0.9
4,043,546	-		Ga0059261_3926	0.81	-0.1
4,043,641	+		Ga0059261_3926	0.84	-0.0
4,043,642	-		Ga0059261_3926	0.84	-0.7
4,043,684	+		Ga0059261_3926	0.85	-2.1
4,043,685	-		Ga0059261_3926	0.85	-0.6
4,043,827	+		Ga0059261_3926	0.89	+0.3
4,043,827	+		Ga0059261_3926	0.89	-0.2
4,043,828	-		Ga0059261_3926	0.89	-1.0
4,044,214	+				-0.4
4,044,214	+				-0.2
4,044,215	-				+0.0
4,044,215	-				+0.5
4,044,215	-				-0.4
4,044,215	-				+0.1
4,044,378	+				+0.3
4,044,379	-				+0.0
4,044,379	-				-0.4
4,044,405	+				-0.2
4,044,405	+				-0.1
4,044,406	-				-0.2
4,044,459	+				-0.2
4,044,459	+				-0.6
4,044,459	+				+0.1
4,044,459	+				+0.6
4,044,459	+				-0.4
4,044,459	+				-0.2
4,044,459	+				-0.1
4,044,460	-				+0.4
4,044,460	-				-1.9
4,044,460	-				+0.9
4,044,460	-				-0.8
4,044,543	+		Ga0059261_3927	0.17	-0.5
4,044,543	+		Ga0059261_3927	0.17	+0.2
4,044,543	+		Ga0059261_3927	0.17	-0.5
4,044,544	-		Ga0059261_3927	0.17	-1.0
4,044,544	-		Ga0059261_3927	0.17	-0.2
4,044,627	+		Ga0059261_3927	0.24	-0.0
4,044,627	+		Ga0059261_3927	0.24	-1.5
4,044,627	+		Ga0059261_3927	0.24	-0.4
4,044,627	+		Ga0059261_3927	0.24	+0.3
4,044,627	+		Ga0059261_3927	0.24	-1.2
4,044,627	+		Ga0059261_3927	0.24	-0.1
4,044,628	-		Ga0059261_3927	0.24	+0.1
4,044,628	-		Ga0059261_3927	0.24	+0.8
4,044,628	-		Ga0059261_3927	0.24	+0.9
4,044,628	-		Ga0059261_3927	0.24	+1.2
4,044,628	-		Ga0059261_3927	0.24	+0.1
4,044,628	-		Ga0059261_3927	0.24	+0.0
4,044,628	-		Ga0059261_3927	0.24	-0.3
4,044,628	-		Ga0059261_3927	0.24	-1.5
4,044,631	+		Ga0059261_3927	0.24	-0.2
4,044,631	+		Ga0059261_3927	0.24	+0.7
4,044,631	+		Ga0059261_3927	0.24	-0.2
4,044,631	+		Ga0059261_3927	0.24	+0.6
4,044,631	+		Ga0059261_3927	0.24	-0.3
4,044,631	+		Ga0059261_3927	0.24	-1.1
4,044,631	+		Ga0059261_3927	0.24	-0.1
4,044,631	+		Ga0059261_3927	0.24	+0.1
4,044,631	+		Ga0059261_3927	0.24	+0.2
4,044,631	+		Ga0059261_3927	0.24	-1.8
4,044,631	+		Ga0059261_3927	0.24	-0.1
4,044,631	+		Ga0059261_3927	0.24	-0.9
4,044,631	+		Ga0059261_3927	0.24	+0.3
4,044,631	+		Ga0059261_3927	0.24	+0.2
4,044,631	+		Ga0059261_3927	0.24	-0.4
4,044,632	-		Ga0059261_3927	0.25	-0.4
4,044,632	-		Ga0059261_3927	0.25	+0.2
4,044,632	-		Ga0059261_3927	0.25	-0.8
4,044,632	-		Ga0059261_3927	0.25	+0.1
4,044,632	-		Ga0059261_3927	0.25	-0.3
4,044,632	-		Ga0059261_3927	0.25	-0.1
4,044,632	-		Ga0059261_3927	0.25	-0.9
4,044,632	-		Ga0059261_3927	0.25	-0.3
4,044,633	+		Ga0059261_3927	0.25	+0.4
4,044,633	+		Ga0059261_3927	0.25	-0.2
4,044,633	+		Ga0059261_3927	0.25	-0.5
4,044,633	+		Ga0059261_3927	0.25	-0.3
4,044,633	+		Ga0059261_3927	0.25	+0.1
4,044,633	+		Ga0059261_3927	0.25	+0.1
4,044,633	+		Ga0059261_3927	0.25	+1.6
4,044,633	+		Ga0059261_3927	0.25	+0.2
4,044,633	+		Ga0059261_3927	0.25	-0.8
4,044,633	+		Ga0059261_3927	0.25	-0.9
4,044,633	+		Ga0059261_3927	0.25	+0.1
4,044,633	+		Ga0059261_3927	0.25	-0.9
4,044,633	+		Ga0059261_3927	0.25	-0.2
4,044,633	+		Ga0059261_3927	0.25	-0.2
4,044,633	+		Ga0059261_3927	0.25	-1.5
4,044,633	+		Ga0059261_3927	0.25	+0.3
4,044,633	+		Ga0059261_3927	0.25	-0.5
4,044,634	-		Ga0059261_3927	0.25	+0.2
4,044,634	-		Ga0059261_3927	0.25	+0.0
4,044,634	-		Ga0059261_3927	0.25	-0.4
4,044,634	-		Ga0059261_3927	0.25	-0.2
4,044,634	-		Ga0059261_3927	0.25	-0.1
4,044,634	-		Ga0059261_3927	0.25	-1.1
4,044,634	-		Ga0059261_3927	0.25	-1.9
4,044,634	-		Ga0059261_3927	0.25	-0.1
4,044,634	-		Ga0059261_3927	0.25	-1.2
4,045,096	-		Ga0059261_3927	0.66	-0.1
4,045,096	-		Ga0059261_3927	0.66	+0.3
4,045,104	+		Ga0059261_3927	0.66	+1.0
4,045,105	-		Ga0059261_3927	0.67	+0.0
4,045,105	-		Ga0059261_3927	0.67	-0.4