Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3924

Experiment: 5-Hydroxymethylfurfural 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 1 mM
4,036,918	+				+0.8
4,036,918	+				+0.2
4,036,973	-				+0.6
4,037,122	+		Ga0059261_3923	0.11	+0.0
4,037,262	+		Ga0059261_3923	0.15	+0.1
4,037,263	-		Ga0059261_3923	0.15	-0.1
4,037,422	+		Ga0059261_3923	0.20	-0.3
4,037,424	+		Ga0059261_3923	0.20	+0.7
4,037,424	+				+1.6
4,037,424	+		Ga0059261_3923	0.20	-1.5
4,037,424	+		Ga0059261_3923	0.20	+0.2
4,037,424	+		Ga0059261_3923	0.20	-0.9
4,037,424	+		Ga0059261_3923	0.20	-1.6
4,037,425	-		Ga0059261_3923	0.20	-0.4
4,037,425	-		Ga0059261_3923	0.20	+0.1
4,037,538	+		Ga0059261_3923	0.24	-0.9
4,037,538	+		Ga0059261_3923	0.24	+0.2
4,037,538	+		Ga0059261_3923	0.24	-0.4
4,037,539	-		Ga0059261_3923	0.24	-0.9
4,037,539	-		Ga0059261_3923	0.24	+0.4
4,037,539	-		Ga0059261_3923	0.24	+1.1
4,037,539	-		Ga0059261_3923	0.24	+0.0
4,037,539	-		Ga0059261_3923	0.24	-0.0
4,037,620	+		Ga0059261_3923	0.27	-0.8
4,037,620	+		Ga0059261_3923	0.27	-0.4
4,037,620	+		Ga0059261_3923	0.27	+0.6
4,037,620	+		Ga0059261_3923	0.27	-0.5
4,037,620	+		Ga0059261_3923	0.27	+1.6
4,037,620	+		Ga0059261_3923	0.27	-0.8
4,037,620	+				+0.6
4,037,620	+		Ga0059261_3923	0.27	-0.2
4,037,621	-		Ga0059261_3923	0.27	-0.4
4,037,621	-		Ga0059261_3923	0.27	+0.4
4,037,621	-		Ga0059261_3923	0.27	-0.1
4,037,621	-		Ga0059261_3923	0.27	+0.6
4,037,621	-		Ga0059261_3923	0.27	+0.8
4,037,621	-		Ga0059261_3923	0.27	+0.5
4,037,621	-		Ga0059261_3923	0.27	+0.4
4,037,621	-		Ga0059261_3923	0.27	+0.6
4,037,621	-		Ga0059261_3923	0.27	+0.1
4,037,695	-		Ga0059261_3923	0.29	-0.4
4,037,729	+		Ga0059261_3923	0.30	+1.0
4,037,729	+				-0.7
4,037,729	+		Ga0059261_3923	0.30	+0.1
4,037,730	-		Ga0059261_3923	0.30	+0.3
4,037,730	-		Ga0059261_3923	0.30	-0.6
4,037,730	-		Ga0059261_3923	0.30	-0.2
4,037,740	-		Ga0059261_3923	0.30	+0.3
4,037,740	-		Ga0059261_3923	0.30	-0.4
4,037,740	-		Ga0059261_3923	0.30	-0.6
4,037,750	-		Ga0059261_3923	0.31	+0.4
4,037,750	-		Ga0059261_3923	0.31	+0.2
4,037,750	-		Ga0059261_3923	0.31	-0.1
4,039,381	+		Ga0059261_3923	0.83	+0.6
4,039,391	+		Ga0059261_3923	0.84	+0.2
4,039,512	+		Ga0059261_3923	0.88	+0.1
4,039,512	+		Ga0059261_3923	0.88	+0.1
4,039,513	-		Ga0059261_3923	0.88	+0.6
4,039,513	-		Ga0059261_3923	0.88	-0.4
4,039,634	-				+0.5
4,039,634	-				-0.5
4,039,718	+				-0.6
4,039,718	+				-0.6
4,039,718	+				-0.5
4,039,718	+				+0.1
4,039,719	-				-0.4
4,039,719	-				-0.1
4,039,719	-				+1.1
4,039,719	-				-0.4
4,039,719	-				-0.9
4,039,752	+				-0.1
4,039,752	+				-0.8
4,039,752	+				-0.8
4,039,752	+				+0.6
4,039,753	-				+0.3
4,039,774	-				-0.7
4,039,958	+				+0.7
4,039,958	+				+1.2
4,039,958	+				-0.1
4,039,959	-				-0.7
4,039,959	-				-0.3
4,039,959	-				-0.3
4,039,959	-				-0.2
4,039,991	+				+0.1
4,039,991	+				-0.7
4,039,991	+				-0.4
4,039,991	+				-1.2
4,039,991	+				+0.6
4,039,991	+				+0.5
4,039,992	-				-0.7
4,039,992	-				+0.2
4,039,992	-				-0.9
4,039,992	-				+0.1
4,039,992	-				-0.3
4,039,992	-				+0.2
4,039,992	-				-0.7
4,039,992	-				+0.5
4,039,992	-				+0.2
4,039,992	-				+0.4
4,040,018	-				+0.6
4,040,018	-				+0.2
4,040,018	-				+0.6
4,040,158	+		Ga0059261_3925	0.25	-3.7
4,040,158	+		Ga0059261_3925	0.25	-0.1
4,040,159	-		Ga0059261_3925	0.25	-0.3
4,040,159	-		Ga0059261_3925	0.25	-0.9
4,040,159	-				-1.4
4,040,159	-		Ga0059261_3925	0.25	-1.3
4,040,159	-		Ga0059261_3925	0.25	-1.3
4,040,211	+		Ga0059261_3925	0.34	-0.6
4,040,212	-		Ga0059261_3925	0.34	+0.9
4,040,232	+		Ga0059261_3925	0.37	+1.3
4,040,279	+		Ga0059261_3925	0.45	-1.7