Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_3687

Experiment: 5-Hydroxymethylfurfural 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 1 mM
3,796,922	+		Ga0059261_3686	0.25	-0.0
3,796,922	+		Ga0059261_3686	0.25	+0.1
3,796,922	+		Ga0059261_3686	0.25	+0.7
3,796,922	+		Ga0059261_3686	0.25	-0.3
3,796,922	+		Ga0059261_3686	0.25	+0.3
3,796,922	+		Ga0059261_3686	0.25	-0.0
3,796,923	-		Ga0059261_3686	0.25	+0.0
3,796,923	-		Ga0059261_3686	0.25	-0.0
3,796,923	-		Ga0059261_3686	0.25	+0.1
3,797,300	+		Ga0059261_3686	0.68	-0.1
3,797,300	+		Ga0059261_3686	0.68	-1.1
3,797,300	+		Ga0059261_3686	0.68	-1.4
3,797,300	+		Ga0059261_3686	0.68	-0.3
3,797,300	+		Ga0059261_3686	0.68	-0.3
3,797,300	+		Ga0059261_3686	0.68	+0.2
3,797,300	+		Ga0059261_3686	0.68	+0.7
3,797,300	+		Ga0059261_3686	0.68	+0.7
3,797,300	+		Ga0059261_3686	0.68	+0.1
3,797,300	+		Ga0059261_3686	0.68	+0.1
3,797,301	-		Ga0059261_3686	0.68	+0.1
3,797,301	-		Ga0059261_3686	0.68	+0.2
3,797,301	-		Ga0059261_3686	0.68	-0.1
3,797,301	-		Ga0059261_3686	0.68	+0.3
3,797,301	-				-0.3
3,797,301	-		Ga0059261_3686	0.68	+0.3
3,797,301	-		Ga0059261_3686	0.68	+0.6
3,797,301	-		Ga0059261_3686	0.68	+1.0
3,797,306	-		Ga0059261_3686	0.68	+0.9
3,797,348	+		Ga0059261_3686	0.73	+0.3
3,797,348	+		Ga0059261_3686	0.73	+0.2
3,797,348	+		Ga0059261_3686	0.73	-0.1
3,797,348	+		Ga0059261_3686	0.73	+0.5
3,797,348	+		Ga0059261_3686	0.73	-0.2
3,797,348	+		Ga0059261_3686	0.73	+0.6
3,797,348	+		Ga0059261_3686	0.73	+0.2
3,797,348	+		Ga0059261_3686	0.73	+0.2
3,797,348	+		Ga0059261_3686	0.73	-0.0
3,797,348	+		Ga0059261_3686	0.73	-0.8
3,797,348	+		Ga0059261_3686	0.73	-0.2
3,797,349	-		Ga0059261_3686	0.73	-0.8
3,797,349	-		Ga0059261_3686	0.73	+0.6
3,797,349	-		Ga0059261_3686	0.73	-0.5
3,797,349	-		Ga0059261_3686	0.73	-0.1
3,797,502	-				+1.4
3,797,507	+				-0.1
3,797,507	+				-0.5
3,797,508	-				-0.2
3,797,508	-				-0.1
3,797,508	-				+0.7
3,797,508	-				-1.7
3,797,508	-				-0.0
3,797,509	+				+0.7
3,797,509	+				-1.3
3,797,509	+				+1.1
3,797,509	+				-0.4
3,797,509	+				-1.7
3,797,509	+				+0.9
3,797,510	-				+0.2
3,797,510	-				+0.1
3,797,586	-				+0.1
3,797,586	-				-0.5
3,797,586	-				+0.2
3,797,586	-				+1.4
3,797,586	-				-0.4
3,797,646	+				-0.2
3,797,647	-				+0.0
3,797,647	-				-0.8
3,797,647	-				+0.2
3,797,647	-				-2.7
3,797,647	-				+0.3
3,797,647	-				+0.5
3,797,647	-				-1.3
3,797,896	-		Ga0059261_3687	0.11	-0.3
3,797,908	+		Ga0059261_3687	0.12	-0.1
3,797,908	+		Ga0059261_3687	0.12	-1.5
3,797,908	+		Ga0059261_3687	0.12	+0.0
3,797,908	+		Ga0059261_3687	0.12	-0.4
3,798,016	+		Ga0059261_3687	0.18	+0.1
3,798,016	+		Ga0059261_3687	0.18	+0.5
3,798,017	-		Ga0059261_3687	0.18	-0.5
3,798,017	-		Ga0059261_3687	0.18	+0.4
3,798,017	-		Ga0059261_3687	0.18	-0.0
3,798,017	-		Ga0059261_3687	0.18	-0.3
3,798,017	-				+0.7
3,798,017	-		Ga0059261_3687	0.18	-0.5
3,798,084	+		Ga0059261_3687	0.22	-0.3
3,798,085	-		Ga0059261_3687	0.22	-1.1
3,798,085	-		Ga0059261_3687	0.22	-0.2
3,798,085	-		Ga0059261_3687	0.22	-0.1
3,798,098	+		Ga0059261_3687	0.23	+0.7
3,798,099	-		Ga0059261_3687	0.23	+0.2
3,798,099	-		Ga0059261_3687	0.23	-0.0
3,798,100	+		Ga0059261_3687	0.23	+0.5
3,798,100	+		Ga0059261_3687	0.23	+0.7
3,798,101	-		Ga0059261_3687	0.23	-0.3
3,798,101	-		Ga0059261_3687	0.23	-0.5
3,798,101	-		Ga0059261_3687	0.23	-0.1
3,798,101	-				+2.0
3,798,130	+		Ga0059261_3687	0.25	-0.2
3,798,130	+		Ga0059261_3687	0.25	+0.8
3,798,131	-		Ga0059261_3687	0.25	+0.2
3,798,131	-		Ga0059261_3687	0.25	+0.1
3,798,131	-		Ga0059261_3687	0.25	-0.3
3,798,131	-		Ga0059261_3687	0.25	+0.6
3,798,131	-		Ga0059261_3687	0.25	-1.0
3,798,131	-		Ga0059261_3687	0.25	+0.6
3,798,193	+		Ga0059261_3687	0.29	-0.1
3,798,193	+		Ga0059261_3687	0.29	+0.7
3,798,193	+		Ga0059261_3687	0.29	-0.4
3,798,193	+		Ga0059261_3687	0.29	+0.1
3,798,193	+		Ga0059261_3687	0.29	+0.8
3,798,193	+		Ga0059261_3687	0.29	+0.5
3,798,193	+		Ga0059261_3687	0.29	+0.0
3,798,193	+		Ga0059261_3687	0.29	-0.3
3,798,193	+		Ga0059261_3687	0.29	-0.6
3,798,193	+		Ga0059261_3687	0.29	+0.1
3,798,194	-		Ga0059261_3687	0.29	+0.1
3,798,194	-		Ga0059261_3687	0.29	-0.3
3,798,194	-		Ga0059261_3687	0.29	+0.5
3,798,194	-		Ga0059261_3687	0.29	-0.5
3,798,194	-				+0.7
3,798,194	-		Ga0059261_3687	0.29	+0.3
3,798,194	-		Ga0059261_3687	0.29	+0.4
3,798,194	-		Ga0059261_3687	0.29	+0.1
3,798,194	-		Ga0059261_3687	0.29	+0.0
3,798,194	-		Ga0059261_3687	0.29	-0.2
3,798,194	-		Ga0059261_3687	0.29	-1.4
3,798,194	-		Ga0059261_3687	0.29	-0.3
3,798,194	-		Ga0059261_3687	0.29	+0.1
3,798,379	+		Ga0059261_3687	0.40	+0.0
3,798,380	-		Ga0059261_3687	0.40	+0.6
3,798,425	+		Ga0059261_3687	0.43	-0.2
3,798,425	+		Ga0059261_3687	0.43	-0.4
3,798,425	+		Ga0059261_3687	0.43	+0.4
3,798,426	-		Ga0059261_3687	0.43	-0.3
3,798,426	-				+1.7
3,798,475	+		Ga0059261_3687	0.46	-0.9
3,798,475	+		Ga0059261_3687	0.46	+0.1
3,798,475	+		Ga0059261_3687	0.46	-0.3
3,798,475	+		Ga0059261_3687	0.46	+0.0
3,798,475	+		Ga0059261_3687	0.46	+0.5
3,798,475	+		Ga0059261_3687	0.46	+0.2
3,798,476	-		Ga0059261_3687	0.46	-0.8
3,798,476	-		Ga0059261_3687	0.46	+2.0
3,798,476	-		Ga0059261_3687	0.46	-1.4
3,798,476	-		Ga0059261_3687	0.46	+0.6
3,798,476	-		Ga0059261_3687	0.46	+0.3
3,798,476	-		Ga0059261_3687	0.46	+0.1
3,798,476	-		Ga0059261_3687	0.46	+0.1
3,798,476	-		Ga0059261_3687	0.46	+0.1
3,798,479	+		Ga0059261_3687	0.46	+0.1
3,798,479	+		Ga0059261_3687	0.46	-0.3
3,798,479	+		Ga0059261_3687	0.46	-1.1
3,798,479	+		Ga0059261_3687	0.46	+0.2
3,798,479	+		Ga0059261_3687	0.46	+0.9
3,798,480	-		Ga0059261_3687	0.46	-0.3
3,798,480	-		Ga0059261_3687	0.46	+0.2
3,798,480	-		Ga0059261_3687	0.46	-0.3
3,798,480	-		Ga0059261_3687	0.46	-0.0
3,798,480	-		Ga0059261_3687	0.46	+0.0
3,798,480	-		Ga0059261_3687	0.46	-0.9
3,798,480	-		Ga0059261_3687	0.46	-0.1
3,798,480	-		Ga0059261_3687	0.46	-0.0
3,798,480	-		Ga0059261_3687	0.46	+1.3
3,798,490	+		Ga0059261_3687	0.47	-0.1
3,798,490	+		Ga0059261_3687	0.47	+0.3
3,798,490	+		Ga0059261_3687	0.47	+2.2
3,798,490	+		Ga0059261_3687	0.47	-0.4
3,798,490	+		Ga0059261_3687	0.47	+1.1
3,798,490	+		Ga0059261_3687	0.47	-0.5
3,798,491	-		Ga0059261_3687	0.47	-1.7
3,798,491	-		Ga0059261_3687	0.47	+0.7
3,798,491	-		Ga0059261_3687	0.47	-0.3
3,798,491	-		Ga0059261_3687	0.47	-2.8
3,798,491	-		Ga0059261_3687	0.47	+0.4
3,798,802	+		Ga0059261_3687	0.66	-0.3
3,798,973	+		Ga0059261_3687	0.76	+0.9
3,798,973	+		Ga0059261_3687	0.76	+0.4
3,798,973	+		Ga0059261_3687	0.76	+0.8
3,798,974	-		Ga0059261_3687	0.76	-0.7
3,798,974	-		Ga0059261_3687	0.76	-0.3
3,798,974	-		Ga0059261_3687	0.76	-0.6
3,798,974	-		Ga0059261_3687	0.76	+1.4
3,798,986	+		Ga0059261_3687	0.77	-0.3
3,798,986	+		Ga0059261_3687	0.77	+1.7
3,798,986	+		Ga0059261_3687	0.77	-0.1
3,798,987	-		Ga0059261_3687	0.77	-0.7
3,798,987	-		Ga0059261_3687	0.77	+0.0
3,798,987	-		Ga0059261_3687	0.77	-0.7
3,798,987	-		Ga0059261_3687	0.77	-0.1
3,799,018	+		Ga0059261_3687	0.79	-0.8
3,799,018	+				+0.1
3,799,018	+		Ga0059261_3687	0.79	+0.2
3,799,018	+		Ga0059261_3687	0.79	+0.7
3,799,019	-				+1.7
3,799,019	-		Ga0059261_3687	0.79	-0.3
3,799,019	-		Ga0059261_3687	0.79	-0.3
3,799,019	-		Ga0059261_3687	0.79	+0.3
3,799,150	+		Ga0059261_3687	0.87	-0.7
3,799,150	+		Ga0059261_3687	0.87	-0.4
3,799,213	+				+1.3
3,799,214	-				+0.6
3,799,214	-				-0.9
3,799,318	+				-0.2
3,799,318	+				-0.1
3,799,319	-				+0.5
3,799,319	-				+0.8
3,799,319	-				+0.0
3,799,399	+				+0.3
3,799,399	+				+0.3
3,799,399	+				-0.1
3,799,400	-				-0.4
3,799,752	-		Ga0059261_3688	0.15	-0.4