Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2725

Experiment: 5-Hydroxymethylfurfural 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 1 mM
2,838,214	-				+1.7
2,838,214	-				+0.5
2,838,271	+				-0.0
2,838,272	-				+0.1
2,838,272	-				-0.4
2,838,281	+				+0.5
2,838,281	+				-1.7
2,838,555	+		Ga0059261_2725	0.43	-0.1
2,838,555	+		Ga0059261_2725	0.43	+0.5
2,838,555	+		Ga0059261_2725	0.43	-0.1
2,838,556	-		Ga0059261_2725	0.43	-1.2
2,838,556	-		Ga0059261_2725	0.43	+0.7
2,838,556	-		Ga0059261_2725	0.43	-0.5
2,838,557	+		Ga0059261_2725	0.44	-0.4
2,838,558	-		Ga0059261_2725	0.45	-1.5
2,838,633	+				+0.1
2,838,634	-				+0.4
2,838,653	+				-0.2
2,838,653	+				+0.3
2,838,653	+				-0.8
2,838,653	+				+0.4
2,838,654	-				+0.0
2,838,781	-		Ga0059261_2726	0.24	-0.5
2,838,804	+				-0.9
2,838,804	+		Ga0059261_2726	0.28	+0.3
2,838,805	-		Ga0059261_2726	0.28	+0.3
2,838,876	+		Ga0059261_2726	0.40	-0.9
2,838,876	+		Ga0059261_2726	0.40	-1.0
2,838,877	-		Ga0059261_2726	0.40	-0.7
2,838,877	-		Ga0059261_2726	0.40	-0.4
2,838,877	-		Ga0059261_2726	0.40	+0.7
2,838,877	-		Ga0059261_2726	0.40	+0.3
2,838,877	-		Ga0059261_2726	0.40	-0.1
2,838,888	+		Ga0059261_2726	0.42	-0.6
2,838,888	+		Ga0059261_2726	0.42	+0.5
2,838,888	+		Ga0059261_2726	0.42	-0.4
2,838,888	+		Ga0059261_2726	0.42	+0.2
2,838,888	+		Ga0059261_2726	0.42	-1.1
2,838,888	+		Ga0059261_2726	0.42	-0.1
2,838,888	+		Ga0059261_2726	0.42	+0.7
2,838,888	+		Ga0059261_2726	0.42	-0.6
2,838,888	+		Ga0059261_2726	0.42	-0.6
2,838,889	-		Ga0059261_2726	0.42	-0.3
2,838,889	-		Ga0059261_2726	0.42	-0.3
2,838,889	-		Ga0059261_2726	0.42	-0.1
2,838,889	-		Ga0059261_2726	0.42	+0.5
2,838,889	-		Ga0059261_2726	0.42	+0.2
2,838,906	+		Ga0059261_2726	0.45	+0.7
2,838,906	+		Ga0059261_2726	0.45	+0.0
2,838,906	+		Ga0059261_2726	0.45	-0.4
2,838,906	+		Ga0059261_2726	0.45	+1.7
2,838,907	-		Ga0059261_2726	0.45	+0.3
2,838,907	-		Ga0059261_2726	0.45	-0.5
2,838,907	-		Ga0059261_2726	0.45	-0.9
2,838,907	-		Ga0059261_2726	0.45	+0.6
2,838,986	-		Ga0059261_2726	0.58	-0.5
2,838,986	-		Ga0059261_2726	0.58	-0.1
2,838,995	+		Ga0059261_2726	0.59	-0.8
2,838,996	-		Ga0059261_2726	0.59	+0.1
2,838,996	-		Ga0059261_2726	0.59	+0.3
2,838,996	-				+0.7
2,838,996	-		Ga0059261_2726	0.59	-0.1
2,839,071	+		Ga0059261_2726	0.72	+0.5
2,839,071	+		Ga0059261_2726	0.72	-0.2
2,839,072	-		Ga0059261_2726	0.72	+1.2
2,839,072	-		Ga0059261_2726	0.72	-0.2
2,839,231	+				+0.2
2,839,231	+				+0.5
2,839,231	+				-1.3
2,839,231	+				+0.1
2,839,231	+				-1.1
2,839,231	+				+0.5
2,839,232	-				-0.1
2,839,232	-				-0.4
2,839,232	-				+0.3
2,839,232	-				-0.4
2,839,232	-				+0.1
2,839,232	-				-0.5
2,839,232	-				+0.3
2,839,340	+				+0.0
2,839,340	+				-0.5
2,839,340	+				-0.7
2,839,341	-				+0.1
2,839,341	-				-0.2
2,839,341	-				+0.1
2,839,341	-				-0.2
2,839,341	-				-1.1
2,839,342	+				+0.0
2,839,342	+				-0.0
2,839,342	+				-0.3
2,839,342	+				+0.3
2,839,342	+				+0.0
2,839,343	-				+0.6
2,839,343	-				+0.4
2,839,343	-				-1.3
2,839,343	-				-0.2
2,839,398	+				+0.4
2,839,398	+				+0.2
2,839,398	+				-0.2
2,839,398	+				-1.6
2,839,398	+				+0.1
2,839,398	+				+0.3
2,839,398	+				-0.1
2,839,399	-				+0.7
2,839,399	-				+0.7
2,839,399	-				-0.5
2,839,399	-				-1.6
2,839,399	-				-0.1
2,839,399	-				-0.1