Strain Fitness in Sphingomonas koreensis DSMZ 15582 around Ga0059261_2224

Experiment: 5-Hydroxymethylfurfural 1 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	5-Hydroxymethylfurfural 1 mM
2,327,411	+				+0.4
2,327,411	+				+0.3
2,327,432	+		Ga0059261_2224	0.13	-0.8
2,327,432	+		Ga0059261_2224	0.13	-0.2
2,327,432	+		Ga0059261_2224	0.13	+0.9
2,327,433	-		Ga0059261_2224	0.14	+0.4
2,327,433	-		Ga0059261_2224	0.14	+0.5
2,327,433	-		Ga0059261_2224	0.14	+0.2
2,327,433	-		Ga0059261_2224	0.14	-0.0
2,327,495	+		Ga0059261_2224	0.28	+1.5
2,327,495	+		Ga0059261_2224	0.28	+0.9
2,327,495	+		Ga0059261_2224	0.28	+0.1
2,327,496	-		Ga0059261_2224	0.29	+0.3
2,327,496	-				+1.4
2,327,496	-		Ga0059261_2224	0.29	+0.8
2,327,696	+		Ga0059261_2224	0.76	+0.8
2,327,696	+		Ga0059261_2224	0.76	-0.0
2,327,696	+		Ga0059261_2224	0.76	+0.3
2,327,696	+		Ga0059261_2224	0.76	+0.1
2,327,696	+		Ga0059261_2224	0.76	-0.1
2,327,697	-		Ga0059261_2224	0.76	+0.3
2,327,796	-				+0.5
2,327,796	-				-0.4
2,327,860	-				-0.5
2,327,860	-				+0.8
2,327,860	-				-0.5
2,327,860	-				+0.6
2,327,861	+				-0.6
2,327,861	+				-0.5
2,327,861	+				-0.1
2,327,861	+				+0.2
2,327,861	+				-0.4
2,327,861	+				+0.2
2,327,861	+				-0.2
2,327,861	+				-0.0
2,327,861	+				-0.4
2,327,861	+				+0.8
2,327,862	-				-0.2
2,327,862	-		Ga0059261_2225	0.10	-1.1
2,327,862	-		Ga0059261_2225	0.10	-0.1
2,327,862	-		Ga0059261_2225	0.10	+0.3
2,327,862	-		Ga0059261_2225	0.10	-0.1
2,327,862	-		Ga0059261_2225	0.10	+0.4
2,327,862	-		Ga0059261_2225	0.10	+1.2
2,327,862	-		Ga0059261_2225	0.10	+2.4
2,327,862	-		Ga0059261_2225	0.10	+0.9
2,327,862	-		Ga0059261_2225	0.10	-0.5
2,327,915	+		Ga0059261_2225	0.18	-0.1
2,327,915	+		Ga0059261_2225	0.18	+0.2
2,327,915	+		Ga0059261_2225	0.18	+0.3
2,327,915	+		Ga0059261_2225	0.18	+0.5
2,327,915	+		Ga0059261_2225	0.18	+1.5
2,327,916	-		Ga0059261_2225	0.18	-0.1
2,327,916	-		Ga0059261_2225	0.18	-1.1
2,327,916	-		Ga0059261_2225	0.18	-0.1
2,327,957	+		Ga0059261_2225	0.24	+0.5
2,327,957	+		Ga0059261_2225	0.24	-0.8
2,327,957	+		Ga0059261_2225	0.24	-0.1
2,327,985	+		Ga0059261_2225	0.28	+0.7
2,327,985	+		Ga0059261_2225	0.28	-0.6
2,327,985	+		Ga0059261_2225	0.28	-0.3
2,327,987	+		Ga0059261_2225	0.29	-0.0
2,327,987	+		Ga0059261_2225	0.29	+0.2
2,327,987	+		Ga0059261_2225	0.29	+1.0
2,327,988	-		Ga0059261_2225	0.29	-0.5
2,327,988	-		Ga0059261_2225	0.29	-0.2
2,327,988	-		Ga0059261_2225	0.29	+0.8
2,327,988	-		Ga0059261_2225	0.29	+0.3
2,328,004	+		Ga0059261_2225	0.31	-0.9
2,328,004	+		Ga0059261_2225	0.31	+0.6
2,328,004	+		Ga0059261_2225	0.31	+0.0
2,328,004	+		Ga0059261_2225	0.31	-1.0
2,328,004	+		Ga0059261_2225	0.31	+0.2
2,328,005	-		Ga0059261_2225	0.31	+0.9
2,328,005	-		Ga0059261_2225	0.31	-1.2
2,328,005	-		Ga0059261_2225	0.31	+0.5
2,328,041	+		Ga0059261_2225	0.37	-1.5
2,328,041	+		Ga0059261_2225	0.37	+0.1
2,328,042	-		Ga0059261_2225	0.37	+1.1
2,328,042	-		Ga0059261_2225	0.37	-1.4
2,328,081	+		Ga0059261_2225	0.43	+0.5
2,328,081	+		Ga0059261_2225	0.43	-1.7
2,328,104	+		Ga0059261_2225	0.46	-0.1
2,328,104	+		Ga0059261_2225	0.46	+0.3
2,328,104	+		Ga0059261_2225	0.46	-0.0
2,328,104	+		Ga0059261_2225	0.46	+0.8
2,328,104	+		Ga0059261_2225	0.46	+1.2
2,328,104	+		Ga0059261_2225	0.46	-0.3
2,328,104	+		Ga0059261_2225	0.46	-0.1
2,328,105	-		Ga0059261_2225	0.46	-0.2
2,328,105	-		Ga0059261_2225	0.46	+0.8
2,328,105	-		Ga0059261_2225	0.46	+0.1
2,328,105	-		Ga0059261_2225	0.46	+0.3
2,328,105	-		Ga0059261_2225	0.46	-0.2
2,328,125	+		Ga0059261_2225	0.49	+0.7
2,328,125	+		Ga0059261_2225	0.49	-1.0
2,328,125	+		Ga0059261_2225	0.49	+0.0
2,328,125	+		Ga0059261_2225	0.49	+1.2
2,328,125	+		Ga0059261_2225	0.49	+0.7
2,328,125	+		Ga0059261_2225	0.49	-0.1
2,328,125	+		Ga0059261_2225	0.49	+0.5
2,328,125	+		Ga0059261_2225	0.49	+1.2
2,328,125	+		Ga0059261_2225	0.49	+0.4
2,328,125	+		Ga0059261_2225	0.49	-2.2
2,328,126	-		Ga0059261_2225	0.49	+1.4
2,328,126	-		Ga0059261_2225	0.49	+0.4
2,328,126	-		Ga0059261_2225	0.49	+0.2
2,328,126	-		Ga0059261_2225	0.49	+0.4
2,328,126	-		Ga0059261_2225	0.49	+0.4
2,328,126	-		Ga0059261_2225	0.49	-0.2
2,328,126	-		Ga0059261_2225	0.49	-0.4
2,328,126	-		Ga0059261_2225	0.49	-0.4
2,328,126	-		Ga0059261_2225	0.49	+0.5
2,328,126	-		Ga0059261_2225	0.49	+0.4
2,328,126	-		Ga0059261_2225	0.49	+0.0
2,328,130	+		Ga0059261_2225	0.50	-0.1
2,328,131	-		Ga0059261_2225	0.50	+0.8
2,328,146	+		Ga0059261_2225	0.52	+0.2
2,328,146	+		Ga0059261_2225	0.52	-0.4
2,328,146	+		Ga0059261_2225	0.52	-0.2
2,328,146	+		Ga0059261_2225	0.52	+0.8
2,328,147	-		Ga0059261_2225	0.52	+0.2
2,328,147	-		Ga0059261_2225	0.52	+0.5
2,328,158	-		Ga0059261_2225	0.54	-0.4
2,328,200	+		Ga0059261_2225	0.60	+1.8
2,328,200	+		Ga0059261_2225	0.60	+0.0
2,328,200	+		Ga0059261_2225	0.60	-0.4
2,328,200	+				-1.2
2,328,201	-		Ga0059261_2225	0.60	-0.2
2,328,201	-		Ga0059261_2225	0.60	-0.7
2,328,201	-		Ga0059261_2225	0.60	+0.1
2,328,201	-		Ga0059261_2225	0.60	+0.7
2,328,201	-		Ga0059261_2225	0.60	-0.9
2,328,201	-		Ga0059261_2225	0.60	+0.2
2,328,201	-		Ga0059261_2225	0.60	+0.2
2,328,201	-		Ga0059261_2225	0.60	-0.0
2,328,201	-		Ga0059261_2225	0.60	+0.1
2,328,201	-		Ga0059261_2225	0.60	+0.4
2,328,499	+				+0.4
2,328,501	-				-2.5
2,328,501	-				+1.5
2,328,515	+				+0.3
2,328,516	-				+0.7
2,328,578	+				+0.4
2,328,578	+				+0.9
2,328,579	-				+0.4
2,328,651	+				+0.7
2,328,651	+				+1.4
2,328,651	+				-0.1
2,328,651	+				-0.1
2,328,652	-				+0.3
2,328,767	+				+1.3