Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03537

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
3,694,804	+		CCNA_03535	0.74	+1.6
3,694,815	+		CCNA_03535	0.75	-1.8
3,694,823	-		CCNA_03535	0.76	-0.7
3,694,825	+		CCNA_03535	0.76	+0.6
3,694,877	+		CCNA_03535	0.82	-0.6
3,694,882	+		CCNA_03535	0.82	-2.2
3,694,984	+				-0.4
3,694,995	-				-0.2
3,695,007	+				+0.6
3,695,007	+				-0.6
3,695,048	+				+0.4
3,695,091	+				-1.0
3,695,108	+				-1.9
3,695,108	+				+0.0
3,695,124	+				+0.1
3,695,134	-				-1.0
3,695,139	-				-0.4
3,695,151	+		CCNA_03536	0.11	-2.9
3,695,151	+		CCNA_03536	0.11	-0.3
3,695,151	+		CCNA_03536	0.11	-0.7
3,695,159	-		CCNA_03536	0.12	-0.2
3,695,242	-		CCNA_03536	0.25	-0.2
3,695,250	-		CCNA_03536	0.26	-1.5
3,695,250	-		CCNA_03536	0.26	-2.2
3,695,267	+		CCNA_03536	0.29	+0.6
3,695,273	+		CCNA_03536	0.30	+1.6
3,695,297	-		CCNA_03536	0.33	+0.3
3,695,321	+		CCNA_03536	0.37	+1.5
3,695,332	-		CCNA_03536	0.38	+0.0
3,695,348	+		CCNA_03536	0.41	+4.0
3,695,368	+		CCNA_03536	0.44	+0.0
3,695,388	-		CCNA_03536	0.47	-0.3
3,695,403	-		CCNA_03536	0.49	+0.3
3,695,408	+		CCNA_03536	0.50	-2.6
3,695,413	+		CCNA_03536	0.51	+2.6
3,695,441	+		CCNA_03536	0.55	+0.3
3,695,446	+		CCNA_03536	0.56	-1.6
3,695,454	-		CCNA_03536	0.57	-0.5
3,695,454	-		CCNA_03536	0.57	-0.6
3,695,515	-		CCNA_03536	0.66	-0.2
3,695,525	+		CCNA_03536	0.68	+1.0
3,695,601	-		CCNA_03536	0.79	+0.6
3,695,601	-		CCNA_03536	0.79	-1.0
3,695,611	-		CCNA_03536	0.81	+1.4
3,695,611	-		CCNA_03536	0.81	-2.2
3,695,665	+		CCNA_03536	0.89	-1.1
3,695,679	-				+0.3
3,695,698	-				-1.1
3,695,727	-				+1.0
3,695,815	-				-1.2
3,695,838	+		CCNA_03537	0.16	-0.6
3,695,855	-		CCNA_03537	0.21	+1.0
3,695,860	+		CCNA_03537	0.22	+0.3
3,695,887	+		CCNA_03537	0.30	-2.4
3,695,895	+		CCNA_03537	0.32	+0.8
3,695,951	+		CCNA_03537	0.48	+1.2
3,695,951	+		CCNA_03537	0.48	+2.6
3,695,984	+		CCNA_03537	0.57	+2.9
3,696,046	+		CCNA_03537	0.75	-0.5
3,696,046	+		CCNA_03537	0.75	+1.6
3,696,073	-		CCNA_03537	0.82	+1.0
3,696,088	-		CCNA_03537	0.86	+3.9
3,696,098	-		CCNA_03537	0.89	+1.6
3,696,133	-				-0.9
3,696,178	-				+2.2
3,696,233	-				+1.0
3,696,238	-		CCNA_03538	0.10	+4.2
3,696,279	-		CCNA_03538	0.15	-1.7
3,696,279	-		CCNA_03538	0.15	-0.9
3,696,279	-		CCNA_03538	0.15	-0.9
3,696,279	-		CCNA_03538	0.15	-0.2
3,696,293	-		CCNA_03538	0.16	-2.0
3,696,302	-		CCNA_03538	0.17	-0.7
3,696,340	+		CCNA_03538	0.22	+0.0
3,696,348	-		CCNA_03538	0.23	-0.2
3,696,370	+		CCNA_03538	0.25	-2.4
3,696,400	+		CCNA_03538	0.29	+1.0
3,696,408	+		CCNA_03538	0.30	+0.3
3,696,408	+		CCNA_03538	0.30	-0.4
3,696,408	+		CCNA_03538	0.30	-0.6
3,696,408	+		CCNA_03538	0.30	+0.6
3,696,408	+		CCNA_03538	0.30	+0.3
3,696,408	+		CCNA_03538	0.30	+1.6
3,696,408	+		CCNA_03538	0.30	+1.0
3,696,408	+		CCNA_03538	0.30	+1.6
3,696,416	-		CCNA_03538	0.31	-0.9
3,696,416	-		CCNA_03538	0.31	-1.7
3,696,416	-		CCNA_03538	0.31	-2.4
3,696,416	-		CCNA_03538	0.31	-2.5
3,696,416	-		CCNA_03538	0.31	+1.0
3,696,416	-		CCNA_03538	0.31	-0.7
3,696,416	-		CCNA_03538	0.31	-0.4
3,696,416	-		CCNA_03538	0.31	+0.3
3,696,416	-		CCNA_03538	0.31	+0.1
3,696,416	-		CCNA_03538	0.31	+0.6
3,696,422	-		CCNA_03538	0.31	-0.9
3,696,474	+		CCNA_03538	0.37	-2.0
3,696,489	+		CCNA_03538	0.39	-1.8
3,696,516	-		CCNA_03538	0.42	-1.3
3,696,524	+		CCNA_03538	0.43	-0.2
3,696,593	-		CCNA_03538	0.51	-1.2
3,696,602	+		CCNA_03538	0.52	-1.6
3,696,607	+		CCNA_03538	0.53	-1.8
3,696,636	+		CCNA_03538	0.56	+1.0
3,696,644	-		CCNA_03538	0.57	-0.2
3,696,663	-		CCNA_03538	0.59	-1.9
3,696,668	-		CCNA_03538	0.60	-3.6
3,696,761	+		CCNA_03538	0.70	-2.0
3,696,785	+		CCNA_03538	0.73	+0.1
3,696,932	-		CCNA_03538	0.90	-0.8
3,696,939	-				-0.9
3,696,959	+				-0.6
3,696,973	-				+0.6
3,696,999	-				-0.4
3,697,003	-				-1.9
3,697,027	+				-1.7
3,697,027	+				+0.6
3,697,027	+				-0.6
3,697,027	+				+0.3
3,697,027	+				+2.2
3,697,027	+				+0.3
3,697,027	+				-0.9
3,697,027	+				+0.7
3,697,027	+				-0.4
3,697,035	-				+0.6
3,697,035	-				+1.9
3,697,035	-				+0.9
3,697,035	-				-0.3
3,697,052	+				-1.3
3,697,123	-		CCNA_03539	0.20	-0.6