Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03060

Experiment: PYE with Phosphomycin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Phosphomycin 0.005 mg/ml
3,211,739	+		CCNA_03058	0.69	-0.1
3,211,751	+		CCNA_03058	0.71	+0.1
3,211,780	+		CCNA_03058	0.74	-1.6
3,211,781	-		CCNA_03058	0.74	-0.9
3,211,823	+		CCNA_03058	0.79	-0.4
3,211,823	+		CCNA_03058	0.79	+1.8
3,211,831	-		CCNA_03058	0.79	-2.2
3,211,870	-		CCNA_03058	0.84	+0.3
3,211,885	+		CCNA_03058	0.85	+1.8
3,211,917	-		CCNA_03058	0.89	-0.4
3,211,917	-		CCNA_03058	0.89	-0.4
3,211,996	-				-0.8
3,212,023	-				+0.8
3,212,025	+				-0.9
3,212,051	+				-1.7
3,212,053	-				+1.6
3,212,059	-				-3.0
3,212,076	-		CCNA_03059	0.11	-0.6
3,212,091	+		CCNA_03059	0.14	+0.1
3,212,094	-		CCNA_03059	0.14	+0.8
3,212,094	-		CCNA_03059	0.14	-1.6
3,212,094	-		CCNA_03059	0.14	+0.8
3,212,105	+		CCNA_03059	0.16	-0.6
3,212,110	+		CCNA_03059	0.17	-0.6
3,212,115	+		CCNA_03059	0.18	+1.8
3,212,144	+		CCNA_03059	0.23	+1.8
3,212,197	+		CCNA_03059	0.33	+0.8
3,212,215	+		CCNA_03059	0.36	+0.2
3,212,266	-		CCNA_03059	0.45	-1.9
3,212,271	+		CCNA_03059	0.46	+1.1
3,212,297	-		CCNA_03059	0.51	-0.8
3,212,308	+		CCNA_03059	0.53	+1.4
3,212,308	+		CCNA_03059	0.53	+0.2
3,212,316	-		CCNA_03059	0.54	+0.8
3,212,328	+		CCNA_03059	0.56	+2.8
3,212,336	-		CCNA_03059	0.58	+1.2
3,212,342	-		CCNA_03059	0.59	-1.1
3,212,347	+		CCNA_03059	0.60	+1.2
3,212,358	+		CCNA_03059	0.62	+0.2
3,212,384	-		CCNA_03059	0.66	-0.2
3,212,385	-		CCNA_03059	0.66	-2.0
3,212,421	+		CCNA_03059	0.73	-0.9
3,212,462	-		CCNA_03059	0.80	-2.8
3,212,462	-		CCNA_03059	0.80	-0.2
3,212,462	-		CCNA_03059	0.80	-0.5
3,212,462	-		CCNA_03059	0.80	-0.9
3,212,474	-		CCNA_03059	0.82	-0.1
3,212,475	+		CCNA_03059	0.83	+1.2
3,212,479	-		CCNA_03059	0.83	+0.3
3,212,481	+		CCNA_03059	0.84	+2.8
3,212,494	+		CCNA_03059	0.86	+2.8
3,212,494	+		CCNA_03059	0.86	-0.8
3,212,524	-				-0.2
3,212,524	-				-2.4
3,212,530	-				+1.5
3,212,540	+				+0.5
3,212,573	+				-1.3
3,212,573	+				-1.6
3,212,573	+				-0.4
3,212,581	-				+0.8
3,212,581	-				+3.8
3,212,581	-				-0.1
3,212,581	-				+0.4
3,212,634	-				-0.4
3,212,636	+				+0.2
3,212,718	-				-0.8
3,212,740	+				+1.8
3,212,740	+				-1.6
3,212,740	+				-1.2
3,212,740	+				+1.8
3,212,748	-				-0.7
3,212,794	+		CCNA_03060	0.32	+0.7
3,212,822	-		CCNA_03060	0.47	+0.2
3,212,836	+		CCNA_03060	0.55	+1.1
3,212,889	+		CCNA_03060	0.84	+1.3
3,212,910	+				-0.1
3,212,911	+				+1.2
3,212,923	-				-2.0
3,212,955	+				+1.5
3,212,963	-				-0.5
3,212,966	+				+0.1
3,212,966	+				-0.4
3,212,966	+				-0.2
3,212,974	-				-1.2
3,212,974	-				-1.3
3,212,974	-				+0.2
3,212,975	+				-0.6
3,212,975	+				-0.7
3,212,982	-				-0.6
3,212,983	-				+0.4
3,212,983	-				+0.9
3,212,983	-				-1.5
3,212,984	-				-1.2
3,212,984	-				-1.4
3,213,090	+				-2.6
3,213,090	+				+0.2
3,213,095	+		CCNA_03061	0.10	-0.7
3,213,098	-		CCNA_03061	0.11	-1.9
3,213,098	-		CCNA_03061	0.11	-0.2
3,213,098	-		CCNA_03061	0.11	+3.8
3,213,098	-		CCNA_03061	0.11	+1.4
3,213,098	-		CCNA_03061	0.11	+0.8
3,213,098	-		CCNA_03061	0.11	-1.1
3,213,098	-		CCNA_03061	0.11	-0.2
3,213,103	-		CCNA_03061	0.11	-1.1
3,213,148	+		CCNA_03061	0.17	+0.2
3,213,161	+		CCNA_03061	0.18	+0.1
3,213,164	-		CCNA_03061	0.19	-0.5
3,213,167	-				+1.8
3,213,169	-		CCNA_03061	0.19	+1.8
3,213,171	+		CCNA_03061	0.20	-1.8
3,213,207	-		CCNA_03061	0.24	+1.2
3,213,211	+		CCNA_03061	0.25	+3.3
3,213,211	+		CCNA_03061	0.25	+0.7
3,213,281	+		CCNA_03061	0.33	+0.8
3,213,281	+		CCNA_03061	0.33	+0.2
3,213,291	+		CCNA_03061	0.34	+0.3
3,213,293	+		CCNA_03061	0.35	+2.8
3,213,299	-		CCNA_03061	0.35	-0.1
3,213,299	-		CCNA_03061	0.35	-0.4
3,213,327	+		CCNA_03061	0.39	-0.4
3,213,338	+				+2.8
3,213,338	+		CCNA_03061	0.40	-0.8
3,213,394	-		CCNA_03061	0.47	-1.9
3,213,413	-		CCNA_03061	0.49	-0.7
3,213,448	-		CCNA_03061	0.53	+0.8
3,213,465	-		CCNA_03061	0.55	+0.8
3,213,472	-		CCNA_03061	0.56	+1.4
3,213,472	-		CCNA_03061	0.56	-0.2
3,213,522	-				+1.8
3,213,523	+		CCNA_03061	0.63	+1.2
3,213,531	-		CCNA_03061	0.64	+0.2
3,213,587	-		CCNA_03061	0.70	-0.1
3,213,606	-		CCNA_03061	0.73	-1.9
3,213,615	+		CCNA_03061	0.74	-0.5
3,213,623	-		CCNA_03061	0.75	-1.2
3,213,623	-		CCNA_03061	0.75	-0.8
3,213,633	-		CCNA_03061	0.76	-2.1
3,213,633	-		CCNA_03061	0.76	+0.8
3,213,639	+		CCNA_03061	0.77	+1.2
3,213,650	+		CCNA_03061	0.78	+0.4
3,213,671	+		CCNA_03061	0.81	-1.3
3,213,679	-		CCNA_03061	0.82	-1.0
3,213,704	+		CCNA_03061	0.85	-0.7
3,213,719	+		CCNA_03061	0.86	+1.2
3,213,719	+		CCNA_03061	0.86	+0.2
3,213,726	+		CCNA_03061	0.87	+0.4
3,213,726	+		CCNA_03061	0.87	-0.2
3,213,726	+		CCNA_03061	0.87	-1.7
3,213,726	+		CCNA_03061	0.87	-1.1
3,213,726	+		CCNA_03061	0.87	+0.2
3,213,726	+		CCNA_03061	0.87	+0.8
3,213,734	-		CCNA_03061	0.88	+0.2
3,213,734	-		CCNA_03061	0.88	+1.5
3,213,734	-		CCNA_03061	0.88	+0.7
3,213,734	-		CCNA_03061	0.88	-2.2
3,213,734	-		CCNA_03061	0.88	-0.6
3,213,734	-		CCNA_03061	0.88	+2.8
3,213,734	-		CCNA_03061	0.88	+0.2
3,213,778	+				-0.7
3,213,801	-				-2.9
3,213,801	-				-0.0
3,213,826	-				+1.1
3,213,877	-				+0.4
3,213,916	+		CCNA_03062	0.11	+0.4