Experiment: Chloramphenicol 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26955 and AO356_26960 overlap by 29 nucleotides AO356_26960 and AO356_26965 are separated by 10 nucleotides
AO356_26955: AO356_26955 - carboxylate--amine ligase, at 6,137,967 to 6,139,130
_26955
AO356_26960: AO356_26960 - SAM-dependent methyltransferase, at 6,139,102 to 6,140,115
_26960
AO356_26965: AO356_26965 - hypothetical protein, at 6,140,126 to 6,141,511
_26965
Position (kb)
6139
6140
6141 Strain fitness (log2 ratio)
-1
0
1 at 6138.474 kb on + strand, within AO356_26955 at 6138.474 kb on + strand, within AO356_26955 at 6138.475 kb on - strand, within AO356_26955 at 6138.475 kb on - strand, within AO356_26955 at 6138.632 kb on - strand, within AO356_26955 at 6138.787 kb on + strand, within AO356_26955 at 6138.788 kb on - strand, within AO356_26955 at 6138.929 kb on - strand, within AO356_26955 at 6139.093 kb on + strand at 6139.094 kb on - strand at 6139.177 kb on + strand at 6139.268 kb on + strand, within AO356_26960 at 6139.355 kb on + strand, within AO356_26960 at 6139.355 kb on + strand, within AO356_26960 at 6139.355 kb on + strand, within AO356_26960 at 6139.356 kb on - strand, within AO356_26960 at 6139.478 kb on + strand, within AO356_26960 at 6139.731 kb on + strand, within AO356_26960 at 6139.732 kb on - strand, within AO356_26960 at 6139.754 kb on + strand, within AO356_26960 at 6140.578 kb on - strand, within AO356_26965 at 6140.826 kb on + strand, within AO356_26965 at 6140.826 kb on + strand, within AO356_26965 at 6140.826 kb on + strand, within AO356_26965 at 6140.826 kb on + strand, within AO356_26965 at 6140.827 kb on - strand, within AO356_26965 at 6140.827 kb on - strand, within AO356_26965 at 6140.829 kb on + strand, within AO356_26965 at 6140.829 kb on + strand, within AO356_26965 at 6140.859 kb on + strand, within AO356_26965 at 6140.928 kb on + strand, within AO356_26965 at 6140.928 kb on + strand, within AO356_26965 at 6140.929 kb on - strand, within AO356_26965 at 6140.943 kb on + strand, within AO356_26965 at 6141.087 kb on + strand, within AO356_26965 at 6141.088 kb on - strand, within AO356_26965 at 6141.088 kb on - strand, within AO356_26965
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.005 mg/ml remove 6,138,474 + AO356_26955 0.44 +0.4 6,138,474 + AO356_26955 0.44 +1.2 6,138,475 - AO356_26955 0.44 -0.2 6,138,475 - AO356_26955 0.44 +0.1 6,138,632 - AO356_26955 0.57 +1.2 6,138,787 + AO356_26955 0.70 -0.1 6,138,788 - AO356_26955 0.71 -0.0 6,138,929 - AO356_26955 0.83 +0.2 6,139,093 + -0.1 6,139,094 - -0.4 6,139,177 + -0.3 6,139,268 + AO356_26960 0.16 -0.3 6,139,355 + AO356_26960 0.25 +0.5 6,139,355 + AO356_26960 0.25 +0.1 6,139,355 + AO356_26960 0.25 +0.4 6,139,356 - AO356_26960 0.25 -0.6 6,139,478 + AO356_26960 0.37 -0.6 6,139,731 + AO356_26960 0.62 +0.1 6,139,732 - AO356_26960 0.62 -0.2 6,139,754 + AO356_26960 0.64 +0.8 6,140,578 - AO356_26965 0.33 +1.5 6,140,826 + AO356_26965 0.51 +0.0 6,140,826 + AO356_26965 0.51 -0.3 6,140,826 + AO356_26965 0.51 -0.3 6,140,826 + AO356_26965 0.51 -0.3 6,140,827 - AO356_26965 0.51 -1.5 6,140,827 - AO356_26965 0.51 -0.9 6,140,829 + AO356_26965 0.51 -0.8 6,140,829 + AO356_26965 0.51 -0.9 6,140,859 + AO356_26965 0.53 +0.4 6,140,928 + AO356_26965 0.58 -1.4 6,140,928 + AO356_26965 0.58 -0.0 6,140,929 - AO356_26965 0.58 -0.3 6,140,943 + AO356_26965 0.59 +0.0 6,141,087 + AO356_26965 0.69 -0.4 6,141,088 - AO356_26965 0.69 -0.5 6,141,088 - AO356_26965 0.69 -0.8
Or see this region's nucleotide sequence