Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_26955
Experiment: Chloramphenicol 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Chloramphenicol 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
6,136,973 | + | AO356_26950 | 0.62 | -0.7 | |
6,136,973 | + | AO356_26950 | 0.62 | +0.2 | |
6,136,973 | + | AO356_26950 | 0.62 | -0.4 | |
6,136,974 | - | AO356_26950 | 0.62 | +0.4 | |
6,136,974 | - | AO356_26950 | 0.62 | -0.1 | |
6,137,219 | + | AO356_26950 | 0.71 | -0.3 | |
6,137,822 | + | +1.0 | |||
6,137,823 | - | +0.1 | |||
6,138,474 | + | AO356_26955 | 0.44 | +0.4 | |
6,138,474 | + | AO356_26955 | 0.44 | +1.2 | |
6,138,475 | - | AO356_26955 | 0.44 | -0.2 | |
6,138,475 | - | AO356_26955 | 0.44 | +0.1 | |
6,138,632 | - | AO356_26955 | 0.57 | +1.2 | |
6,138,787 | + | AO356_26955 | 0.70 | -0.1 | |
6,138,788 | - | AO356_26955 | 0.71 | -0.0 | |
6,138,929 | - | AO356_26955 | 0.83 | +0.2 | |
6,139,093 | + | -0.1 | |||
6,139,094 | - | -0.4 | |||
6,139,177 | + | -0.3 | |||
6,139,268 | + | AO356_26960 | 0.16 | -0.3 | |
6,139,355 | + | AO356_26960 | 0.25 | +0.5 | |
6,139,355 | + | AO356_26960 | 0.25 | +0.1 | |
6,139,355 | + | AO356_26960 | 0.25 | +0.4 | |
6,139,356 | - | AO356_26960 | 0.25 | -0.6 | |
6,139,478 | + | AO356_26960 | 0.37 | -0.6 | |
6,139,731 | + | AO356_26960 | 0.62 | +0.1 | |
6,139,732 | - | AO356_26960 | 0.62 | -0.2 | |
6,139,754 | + | AO356_26960 | 0.64 | +0.8 |
Or see this region's nucleotide sequence