Experiment: Chloramphenicol 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26675 and AO356_26680 are separated by 83 nucleotides AO356_26680 and AO356_26685 are separated by 94 nucleotides AO356_26685 and AO356_26690 are separated by 75 nucleotides AO356_26690 and AO356_26695 overlap by 1 nucleotides
AO356_26675: AO356_26675 - hypothetical protein, at 6,074,771 to 6,075,313
_26675
AO356_26680: AO356_26680 - hypothetical protein, at 6,075,397 to 6,076,095
_26680
AO356_26685: AO356_26685 - phosphate import ATP-binding protein PstB, at 6,076,190 to 6,076,951
_26685
AO356_26690: AO356_26690 - phosphate ABC transporter permease, at 6,077,027 to 6,077,938
_26690
AO356_26695: AO356_26695 - phosphate ABC transporter permease, at 6,077,938 to 6,078,903
_26695
Position (kb)
6076
6077 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 6075.294 kb on - strand at 6075.485 kb on + strand, within AO356_26680 at 6075.547 kb on + strand, within AO356_26680 at 6075.608 kb on - strand, within AO356_26680 at 6075.629 kb on + strand, within AO356_26680 at 6075.630 kb on - strand, within AO356_26680 at 6075.630 kb on - strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.701 kb on + strand, within AO356_26680 at 6075.702 kb on - strand, within AO356_26680 at 6075.702 kb on - strand, within AO356_26680 at 6075.932 kb on + strand, within AO356_26680 at 6076.086 kb on + strand at 6076.192 kb on - strand at 6076.212 kb on + strand at 6076.212 kb on + strand at 6076.212 kb on + strand at 6076.328 kb on - strand, within AO356_26685 at 6076.381 kb on - strand, within AO356_26685 at 6076.611 kb on - strand, within AO356_26685 at 6076.611 kb on - strand, within AO356_26685 at 6076.707 kb on + strand, within AO356_26685 at 6076.956 kb on - strand at 6077.001 kb on - strand at 6077.029 kb on - strand at 6077.031 kb on + strand at 6077.031 kb on + strand at 6077.051 kb on - strand at 6077.062 kb on + strand at 6077.152 kb on - strand, within AO356_26690 at 6077.152 kb on - strand, within AO356_26690 at 6077.152 kb on - strand, within AO356_26690 at 6077.208 kb on + strand, within AO356_26690 at 6077.209 kb on - strand, within AO356_26690 at 6077.218 kb on - strand, within AO356_26690 at 6077.479 kb on + strand, within AO356_26690 at 6077.506 kb on - strand, within AO356_26690 at 6077.506 kb on - strand, within AO356_26690 at 6077.778 kb on + strand, within AO356_26690 at 6077.779 kb on - strand, within AO356_26690 at 6077.779 kb on - strand, within AO356_26690 at 6077.943 kb on + strand at 6077.943 kb on + strand at 6077.944 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloramphenicol 0.005 mg/ml remove 6,075,294 - +0.2 6,075,485 + AO356_26680 0.13 +0.1 6,075,547 + AO356_26680 0.21 +0.3 6,075,608 - AO356_26680 0.30 +0.4 6,075,629 + AO356_26680 0.33 +1.2 6,075,630 - AO356_26680 0.33 -0.0 6,075,630 - AO356_26680 0.33 +1.3 6,075,701 + AO356_26680 0.43 +0.8 6,075,701 + AO356_26680 0.43 +0.5 6,075,701 + AO356_26680 0.43 +0.5 6,075,702 - AO356_26680 0.44 +0.3 6,075,702 - AO356_26680 0.44 -1.7 6,075,932 + AO356_26680 0.77 +1.6 6,076,086 + -0.7 6,076,192 - -0.6 6,076,212 + +1.2 6,076,212 + -1.0 6,076,212 + +0.7 6,076,328 - AO356_26685 0.18 +2.8 6,076,381 - AO356_26685 0.25 +0.5 6,076,611 - AO356_26685 0.55 +0.2 6,076,611 - AO356_26685 0.55 -0.3 6,076,707 + AO356_26685 0.68 -0.2 6,076,956 - +0.4 6,077,001 - +0.4 6,077,029 - +0.4 6,077,031 + +0.1 6,077,031 + +0.1 6,077,051 - -0.0 6,077,062 + +0.8 6,077,152 - AO356_26690 0.14 -0.2 6,077,152 - AO356_26690 0.14 +1.6 6,077,152 - AO356_26690 0.14 -0.4 6,077,208 + AO356_26690 0.20 +1.0 6,077,209 - AO356_26690 0.20 +0.2 6,077,218 - AO356_26690 0.21 -0.3 6,077,479 + AO356_26690 0.50 +0.0 6,077,506 - AO356_26690 0.53 +0.3 6,077,506 - AO356_26690 0.53 +0.5 6,077,778 + AO356_26690 0.82 +0.3 6,077,779 - AO356_26690 0.82 +0.8 6,077,779 - AO356_26690 0.82 +0.0 6,077,943 + +0.6 6,077,943 + -1.9 6,077,944 - +0.0
Or see this region's nucleotide sequence