Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_11615

Experiment: Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Chloramphenicol 0.005 mg/ml
2,627,942	+				-0.5
2,627,943	-				+0.4
2,628,223	-		AO356_11610	0.36	+0.1
2,628,631	+		AO356_11610	0.88	-1.4
2,628,631	+		AO356_11610	0.88	-1.4
2,628,833	+				-1.9
2,628,841	+				-0.3
2,628,842	-				+0.3
2,628,854	+				+0.4
2,628,854	+				+0.0
2,628,854	+				+0.9
2,628,854	+				-0.2
2,628,854	+				-0.6
2,628,854	+				-0.6
2,628,854	+				-0.0
2,628,855	-				+0.2
2,628,855	-				+0.2
2,628,886	+				+0.3
2,628,886	+				+1.0
2,628,887	-				+0.4
2,628,887	-				+0.8
2,628,958	-				+0.9
2,628,970	-				+0.2
2,629,022	-				-0.3
2,629,173	+		AO356_11615	0.17	+0.1
2,629,173	+		AO356_11615	0.17	+0.1
2,629,173	+		AO356_11615	0.17	+0.7
2,629,173	+		AO356_11615	0.17	-0.3
2,629,173	+		AO356_11615	0.17	-0.4
2,629,174	-		AO356_11615	0.17	+0.7
2,629,174	-		AO356_11615	0.17	+0.1
2,629,174	-		AO356_11615	0.17	-0.3
2,629,193	+		AO356_11615	0.18	+0.6
2,629,193	+		AO356_11615	0.18	+1.1
2,629,193	+		AO356_11615	0.18	+0.7
2,629,193	+		AO356_11615	0.18	+0.5
2,629,193	+		AO356_11615	0.18	+0.7
2,629,193	+		AO356_11615	0.18	+0.6
2,629,193	+		AO356_11615	0.18	-0.1
2,629,193	+		AO356_11615	0.18	+0.4
2,629,194	-		AO356_11615	0.19	+0.6
2,629,194	-		AO356_11615	0.19	-0.2
2,629,194	-		AO356_11615	0.19	-0.2
2,629,194	-		AO356_11615	0.19	+0.5
2,629,194	-		AO356_11615	0.19	-0.5
2,629,194	-		AO356_11615	0.19	+0.3
2,629,194	-		AO356_11615	0.19	+0.5
2,629,194	-		AO356_11615	0.19	+0.4
2,629,238	-		AO356_11615	0.21	+0.4
2,629,276	+		AO356_11615	0.24	-0.0
2,629,276	+		AO356_11615	0.24	+1.5
2,629,276	+		AO356_11615	0.24	+0.5
2,629,277	-		AO356_11615	0.24	-0.5
2,629,277	-		AO356_11615	0.24	+0.6
2,629,296	+		AO356_11615	0.25	+0.6
2,629,296	+		AO356_11615	0.25	-0.1
2,629,297	-		AO356_11615	0.25	+0.5
2,629,297	-		AO356_11615	0.25	+0.7
2,629,297	-		AO356_11615	0.25	+1.0
2,629,376	+		AO356_11615	0.31	+0.2
2,629,377	-		AO356_11615	0.31	+0.4
2,629,377	-		AO356_11615	0.31	+0.3
2,629,405	+		AO356_11615	0.32	+1.1
2,629,405	+		AO356_11615	0.32	-0.5
2,629,406	-		AO356_11615	0.32	+0.2
2,629,406	-		AO356_11615	0.32	+1.2
2,629,406	-		AO356_11615	0.32	+0.4
2,629,406	-		AO356_11615	0.32	+0.1
2,629,438	+		AO356_11615	0.35	-0.3
2,629,438	+		AO356_11615	0.35	-0.3
2,629,438	+		AO356_11615	0.35	+0.6
2,629,439	-		AO356_11615	0.35	+0.1
2,629,439	-		AO356_11615	0.35	+0.3
2,629,677	+		AO356_11615	0.50	+0.5
2,629,677	+		AO356_11615	0.50	+1.2
2,629,677	+		AO356_11615	0.50	+0.9
2,629,677	+		AO356_11615	0.50	+1.0
2,629,677	+		AO356_11615	0.50	-0.0
2,629,677	+		AO356_11615	0.50	+0.9
2,629,678	-		AO356_11615	0.50	+0.5
2,629,678	-		AO356_11615	0.50	-0.0
2,629,678	-		AO356_11615	0.50	+0.8
2,629,678	-		AO356_11615	0.50	+0.5
2,629,883	+		AO356_11615	0.64	+0.5
2,629,883	+		AO356_11615	0.64	-0.0
2,629,883	+		AO356_11615	0.64	+1.0
2,629,884	-		AO356_11615	0.64	-0.1
2,629,884	-		AO356_11615	0.64	+0.4
2,629,884	-		AO356_11615	0.64	-0.6
2,629,884	-		AO356_11615	0.64	+0.4
2,629,884	-		AO356_11615	0.64	+0.2
2,629,982	+		AO356_11615	0.70	+0.7
2,629,982	+		AO356_11615	0.70	+0.4
2,629,983	-		AO356_11615	0.70	+0.6
2,629,983	-		AO356_11615	0.70	+0.3
2,629,983	-		AO356_11615	0.70	+0.5
2,629,983	-		AO356_11615	0.70	+1.5
2,629,983	-		AO356_11615	0.70	+0.6
2,629,983	-		AO356_11615	0.70	+0.1
2,630,052	-		AO356_11615	0.75	-1.0
2,630,052	-		AO356_11615	0.75	+0.9
2,630,052	-		AO356_11615	0.75	+0.0
2,630,052	-		AO356_11615	0.75	+0.0
2,630,184	+		AO356_11615	0.84	-0.2
2,630,184	+		AO356_11615	0.84	+0.9
2,630,184	+		AO356_11615	0.84	+1.3
2,630,184	+		AO356_11615	0.84	+1.0
2,630,184	+		AO356_11615	0.84	+1.3
2,630,185	-		AO356_11615	0.84	+0.6
2,630,185	-		AO356_11615	0.84	+0.4
2,630,185	-		AO356_11615	0.84	+1.0
2,630,185	-		AO356_11615	0.84	+0.4
2,630,185	-		AO356_11615	0.84	+0.4
2,630,185	-		AO356_11615	0.84	+1.2
2,630,185	-		AO356_11615	0.84	+0.8
2,630,185	-		AO356_11615	0.84	+0.7
2,630,191	+		AO356_11615	0.84	+0.4
2,630,191	+		AO356_11615	0.84	+1.2
2,630,191	+		AO356_11615	0.84	-0.0
2,630,191	+		AO356_11615	0.84	+0.1
2,630,191	+		AO356_11615	0.84	+0.8
2,630,192	-		AO356_11615	0.84	+1.1
2,630,192	-		AO356_11615	0.84	-0.1
2,630,192	-		AO356_11615	0.84	+0.5
2,630,192	-		AO356_11615	0.84	-0.0
2,630,239	+		AO356_11615	0.87	+0.8
2,630,239	+		AO356_11615	0.87	+2.0
2,630,239	+		AO356_11615	0.87	+0.1
2,630,240	-		AO356_11615	0.87	-0.2
2,630,240	-		AO356_11615	0.87	-0.2
2,630,240	-		AO356_11615	0.87	+0.9
2,630,344	+				+0.8
2,630,345	-				+1.2
2,630,345	-				+1.3
2,630,424	+				+0.5
2,630,430	+				+0.8
2,630,430	+				+0.7
2,630,430	+				-0.2
2,630,430	+				+0.7
2,630,430	+				+0.7
2,630,430	+				+0.3
2,630,430	+				-0.1
2,630,430	+				-0.5
2,630,430	+				-0.1
2,630,430	+				+0.0
2,630,431	-				+1.2
2,630,431	-				+2.1
2,630,431	-				+1.4
2,630,431	-				-0.2
2,630,431	-				-2.1
2,630,463	-				+0.3
2,630,481	-				-0.0
2,630,481	-				+0.8
2,630,508	+				+0.7
2,630,508	+				+1.2
2,630,509	-				-0.7
2,630,509	-				+1.1
2,630,510	+				+0.0
2,630,511	-				+0.8
2,630,636	+				+1.2
2,630,636	+				-0.0
2,630,677	+				+0.7
2,630,710	+				+2.0
2,630,710	+				+1.0
2,630,710	+				+0.2
2,630,711	-				+0.2
2,630,711	-				-0.0
2,630,711	-				+0.4
2,630,711	-				+0.4
2,630,976	+		AO356_11620	0.42	+1.1
2,630,976	+		AO356_11620	0.42	+0.1
2,630,976	+		AO356_11620	0.42	+1.1
2,630,976	+		AO356_11620	0.42	+0.8
2,630,976	+		AO356_11620	0.42	+1.5
2,630,976	+		AO356_11620	0.42	+0.9
2,630,976	+		AO356_11620	0.42	+0.0
2,630,976	+		AO356_11620	0.42	+0.0
2,630,976	+		AO356_11620	0.42	+1.0
2,630,976	+		AO356_11620	0.42	-0.2
2,630,977	-		AO356_11620	0.43	+1.2
2,630,977	-		AO356_11620	0.43	+1.1
2,630,977	-		AO356_11620	0.43	+0.5
2,630,977	-		AO356_11620	0.43	-0.2
2,630,977	-		AO356_11620	0.43	+0.7
2,631,210	+		AO356_11620	0.74	+0.7
2,631,211	-		AO356_11620	0.74	+0.2
2,631,211	-		AO356_11620	0.74	+1.0
2,631,211	-		AO356_11620	0.74	+0.2
2,631,211	-		AO356_11620	0.74	+0.6
2,631,211	-		AO356_11620	0.74	+0.1
2,631,211	-		AO356_11620	0.74	+1.0
2,631,216	+		AO356_11620	0.75	+0.8
2,631,216	+		AO356_11620	0.75	+0.9
2,631,216	+		AO356_11620	0.75	+1.0
2,631,216	+		AO356_11620	0.75	+0.9
2,631,217	-		AO356_11620	0.75	+0.6
2,631,217	-		AO356_11620	0.75	+0.3
2,631,217	-		AO356_11620	0.75	+0.3
2,631,217	-		AO356_11620	0.75	+0.4
2,631,272	+		AO356_11620	0.83	+0.5
2,631,272	+		AO356_11620	0.83	+1.0
2,631,272	+		AO356_11620	0.83	+0.5
2,631,272	+		AO356_11620	0.83	+1.0
2,631,272	+		AO356_11620	0.83	-0.1
2,631,272	+		AO356_11620	0.83	+0.7
2,631,272	+		AO356_11620	0.83	+0.2
2,631,272	+		AO356_11620	0.83	+0.8
2,631,272	+		AO356_11620	0.83	+1.1
2,631,272	+		AO356_11620	0.83	-0.1
2,631,272	+		AO356_11620	0.83	-0.3
2,631,272	+		AO356_11620	0.83	+0.6
2,631,272	+		AO356_11620	0.83	+0.6
2,631,272	+		AO356_11620	0.83	+0.2
2,631,272	+		AO356_11620	0.83	+0.2
2,631,273	-		AO356_11620	0.83	+0.8
2,631,273	-		AO356_11620	0.83	+0.1
2,631,273	-		AO356_11620	0.83	+1.1
2,631,273	-		AO356_11620	0.83	+1.0
2,631,273	-		AO356_11620	0.83	-0.0
2,631,273	-		AO356_11620	0.83	-0.4
2,631,273	-		AO356_11620	0.83	+0.9
2,631,273	-		AO356_11620	0.83	-1.7
2,631,273	-		AO356_11620	0.83	+0.0
2,631,273	-		AO356_11620	0.83	+0.8
2,631,273	-		AO356_11620	0.83	+0.8
2,631,273	-		AO356_11620	0.83	+1.2
2,631,273	-		AO356_11620	0.83	-0.1
2,631,276	+		AO356_11620	0.83	+0.1
2,631,276	+		AO356_11620	0.83	+1.0
2,631,276	+		AO356_11620	0.83	+0.7
2,631,276	+		AO356_11620	0.83	+1.5
2,631,276	+		AO356_11620	0.83	+0.4
2,631,277	-		AO356_11620	0.83	+0.6
2,631,325	+				+0.7
2,631,326	-				+2.0
2,631,326	-				+1.2
2,631,326	-				+1.5
2,631,326	-				-0.3
2,631,326	-				+0.6
2,631,336	+				+0.6
2,631,336	+				+0.5
2,631,336	+				+1.1
2,631,337	-				+0.4
2,631,337	-				+0.7
2,631,337	-				-0.4
2,631,337	-				+0.1
2,631,396	+				+0.2
2,631,396	+				-1.0
2,631,396	+				-0.9
2,631,397	-				+0.1
2,631,397	-				+0.7
2,631,414	+				+0.4
2,631,414	+				+1.0
2,631,414	+				+0.3
2,631,414	+				-0.5
2,631,414	+				-0.0
2,631,414	+				+0.6
2,631,415	-				-1.1
2,631,415	-				-0.2
2,631,415	-				+0.5