Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2850 and Dshi_2851 are separated by 49 nucleotides Dshi_2851 and Dshi_2852 are separated by 102 nucleotides
Dshi_2850: Dshi_2850 - AAA ATPase (RefSeq), at 3,007,134 to 3,008,669
_2850
Dshi_2851: Dshi_2851 - autoinducer synthesis protein (RefSeq), at 3,008,719 to 3,009,339
_2851
Dshi_2852: Dshi_2852 - transcriptional regulator, LuxR family (RefSeq), at 3,009,442 to 3,010,152
_2852
Position (kb)
3008
3009
3010 Strain fitness (log2 ratio)
-1
0
1
2 at 3007.929 kb on + strand, within Dshi_2850 at 3007.970 kb on - strand, within Dshi_2850 at 3007.976 kb on + strand, within Dshi_2850 at 3008.021 kb on + strand at 3008.101 kb on - strand, within Dshi_2850 at 3008.360 kb on + strand, within Dshi_2850 at 3008.485 kb on + strand, within Dshi_2850 at 3008.586 kb on - strand at 3008.664 kb on - strand at 3008.724 kb on - strand at 3008.777 kb on - strand at 3008.792 kb on + strand, within Dshi_2851 at 3008.835 kb on - strand, within Dshi_2851 at 3008.854 kb on - strand, within Dshi_2851 at 3008.957 kb on - strand, within Dshi_2851 at 3008.959 kb on - strand, within Dshi_2851 at 3008.959 kb on - strand, within Dshi_2851 at 3009.046 kb on + strand, within Dshi_2851 at 3009.069 kb on - strand, within Dshi_2851 at 3009.069 kb on - strand, within Dshi_2851 at 3009.111 kb on + strand, within Dshi_2851 at 3009.116 kb on + strand, within Dshi_2851 at 3009.119 kb on - strand, within Dshi_2851 at 3009.251 kb on + strand, within Dshi_2851 at 3009.305 kb on + strand at 3009.313 kb on - strand at 3009.313 kb on - strand at 3009.342 kb on - strand at 3009.534 kb on + strand, within Dshi_2852 at 3009.802 kb on + strand, within Dshi_2852 at 3009.859 kb on + strand, within Dshi_2852 at 3009.891 kb on + strand, within Dshi_2852 at 3009.923 kb on - strand, within Dshi_2852 at 3009.995 kb on - strand, within Dshi_2852 at 3010.002 kb on - strand, within Dshi_2852 at 3010.023 kb on + strand, within Dshi_2852 at 3010.079 kb on - strand, within Dshi_2852 at 3010.135 kb on + strand at 3010.142 kb on - strand at 3010.164 kb on + strand at 3010.164 kb on + strand at 3010.164 kb on + strand at 3010.164 kb on + strand at 3010.171 kb on + strand at 3010.171 kb on + strand at 3010.172 kb on - strand at 3010.172 kb on - strand at 3010.172 kb on - strand at 3010.172 kb on - strand at 3010.172 kb on - strand at 3010.172 kb on - strand at 3010.177 kb on + strand at 3010.245 kb on + strand at 3010.279 kb on - strand at 3010.286 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 3,007,929 + Dshi_2850 0.52 -0.4 3,007,970 - Dshi_2850 0.54 -1.3 3,007,976 + Dshi_2850 0.55 +0.1 3,008,021 + -0.9 3,008,101 - Dshi_2850 0.63 -0.5 3,008,360 + Dshi_2850 0.80 -0.2 3,008,485 + Dshi_2850 0.88 -1.5 3,008,586 - -0.7 3,008,664 - -0.1 3,008,724 - +0.1 3,008,777 - +0.3 3,008,792 + Dshi_2851 0.12 -0.1 3,008,835 - Dshi_2851 0.19 -0.8 3,008,854 - Dshi_2851 0.22 -0.0 3,008,957 - Dshi_2851 0.38 -0.7 3,008,959 - Dshi_2851 0.39 +0.0 3,008,959 - Dshi_2851 0.39 +0.7 3,009,046 + Dshi_2851 0.53 +0.6 3,009,069 - Dshi_2851 0.56 -0.6 3,009,069 - Dshi_2851 0.56 -0.1 3,009,111 + Dshi_2851 0.63 -0.2 3,009,116 + Dshi_2851 0.64 +1.0 3,009,119 - Dshi_2851 0.64 -0.9 3,009,251 + Dshi_2851 0.86 +0.0 3,009,305 + +0.3 3,009,313 - +0.8 3,009,313 - +0.7 3,009,342 - -1.0 3,009,534 + Dshi_2852 0.13 +1.2 3,009,802 + Dshi_2852 0.51 +0.3 3,009,859 + Dshi_2852 0.59 +0.2 3,009,891 + Dshi_2852 0.63 +1.1 3,009,923 - Dshi_2852 0.68 +0.1 3,009,995 - Dshi_2852 0.78 +0.7 3,010,002 - Dshi_2852 0.79 +0.8 3,010,023 + Dshi_2852 0.82 +2.0 3,010,079 - Dshi_2852 0.90 +0.7 3,010,135 + +0.8 3,010,142 - +0.2 3,010,164 + +0.2 3,010,164 + -0.4 3,010,164 + +1.3 3,010,164 + +0.8 3,010,171 + +1.6 3,010,171 + -0.3 3,010,172 - +1.3 3,010,172 - +0.8 3,010,172 - +0.1 3,010,172 - +1.0 3,010,172 - +0.6 3,010,172 - +0.1 3,010,177 + +0.7 3,010,245 + -0.9 3,010,279 - +1.2 3,010,286 + -0.5
Or see this region's nucleotide sequence