Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_2241 and Dshi_2242 overlap by 38 nucleotides Dshi_2242 and Dshi_2243 are separated by 89 nucleotides Dshi_2243 and Dshi_2244 are separated by 55 nucleotides
Dshi_2241: Dshi_2241 - protein of unknown function DUF1486 (RefSeq), at 2,364,498 to 2,365,532
_2241
Dshi_2242: Dshi_2242 - Histidinol dehydrogenase (RefSeq), at 2,365,495 to 2,366,820
_2242
Dshi_2243: Dshi_2243 - alpha/beta hydrolase fold (RefSeq), at 2,366,910 to 2,367,665
_2243
Dshi_2244: Dshi_2244 - DNA repair endonuclease mmcB (DUF1052) (from data) , at 2,367,721 to 2,368,161
_2244
Position (kb)
2365
2366
2367 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2364.501 kb on + strand at 2364.507 kb on - strand at 2364.509 kb on + strand at 2364.509 kb on + strand at 2364.517 kb on - strand at 2364.530 kb on + strand at 2364.530 kb on + strand at 2364.538 kb on - strand at 2364.538 kb on - strand at 2364.538 kb on - strand at 2364.538 kb on - strand at 2364.538 kb on - strand at 2364.538 kb on - strand at 2364.588 kb on + strand at 2364.596 kb on - strand at 2364.598 kb on + strand at 2364.665 kb on - strand, within Dshi_2241 at 2364.673 kb on - strand, within Dshi_2241 at 2364.675 kb on + strand, within Dshi_2241 at 2364.676 kb on + strand, within Dshi_2241 at 2364.684 kb on - strand, within Dshi_2241 at 2364.689 kb on - strand, within Dshi_2241 at 2364.689 kb on - strand, within Dshi_2241 at 2364.710 kb on + strand, within Dshi_2241 at 2364.714 kb on - strand, within Dshi_2241 at 2364.781 kb on + strand, within Dshi_2241 at 2364.781 kb on + strand, within Dshi_2241 at 2364.893 kb on - strand, within Dshi_2241 at 2364.899 kb on + strand, within Dshi_2241 at 2364.907 kb on - strand, within Dshi_2241 at 2364.907 kb on - strand, within Dshi_2241 at 2364.935 kb on - strand, within Dshi_2241 at 2364.963 kb on + strand, within Dshi_2241 at 2365.027 kb on - strand, within Dshi_2241 at 2365.089 kb on + strand, within Dshi_2241 at 2365.097 kb on - strand, within Dshi_2241 at 2365.097 kb on - strand, within Dshi_2241 at 2365.160 kb on - strand, within Dshi_2241 at 2365.183 kb on + strand, within Dshi_2241 at 2365.217 kb on + strand, within Dshi_2241 at 2365.245 kb on + strand, within Dshi_2241 at 2365.245 kb on + strand, within Dshi_2241 at 2365.303 kb on - strand, within Dshi_2241 at 2365.306 kb on - strand, within Dshi_2241 at 2365.313 kb on - strand, within Dshi_2241 at 2365.381 kb on - strand, within Dshi_2241 at 2365.438 kb on - strand at 2365.466 kb on + strand at 2365.563 kb on + strand at 2365.570 kb on - strand at 2365.680 kb on - strand, within Dshi_2242 at 2365.761 kb on + strand, within Dshi_2242 at 2365.946 kb on - strand, within Dshi_2242 at 2365.960 kb on - strand, within Dshi_2242 at 2365.977 kb on - strand, within Dshi_2242 at 2366.004 kb on + strand, within Dshi_2242 at 2366.139 kb on - strand, within Dshi_2242 at 2366.167 kb on - strand, within Dshi_2242 at 2366.304 kb on - strand, within Dshi_2242 at 2366.314 kb on - strand, within Dshi_2242 at 2366.391 kb on - strand, within Dshi_2242 at 2366.457 kb on + strand, within Dshi_2242 at 2366.473 kb on + strand, within Dshi_2242 at 2366.499 kb on + strand, within Dshi_2242 at 2366.499 kb on + strand, within Dshi_2242 at 2366.524 kb on + strand, within Dshi_2242 at 2366.609 kb on + strand, within Dshi_2242 at 2366.618 kb on - strand, within Dshi_2242 at 2366.736 kb on - strand at 2366.803 kb on + strand at 2366.824 kb on - strand at 2366.839 kb on - strand at 2366.847 kb on - strand at 2366.930 kb on + strand at 2366.969 kb on + strand at 2366.989 kb on + strand, within Dshi_2243 at 2367.003 kb on + strand, within Dshi_2243 at 2367.007 kb on + strand, within Dshi_2243 at 2367.056 kb on - strand, within Dshi_2243 at 2367.106 kb on + strand, within Dshi_2243 at 2367.166 kb on - strand, within Dshi_2243 at 2367.171 kb on + strand, within Dshi_2243 at 2367.234 kb on - strand, within Dshi_2243 at 2367.234 kb on - strand, within Dshi_2243 at 2367.320 kb on + strand, within Dshi_2243 at 2367.328 kb on - strand, within Dshi_2243 at 2367.328 kb on - strand, within Dshi_2243 at 2367.347 kb on - strand, within Dshi_2243 at 2367.375 kb on - strand, within Dshi_2243 at 2367.399 kb on + strand, within Dshi_2243 at 2367.516 kb on - strand, within Dshi_2243 at 2367.516 kb on - strand, within Dshi_2243 at 2367.516 kb on - strand, within Dshi_2243 at 2367.521 kb on - strand, within Dshi_2243 at 2367.630 kb on + strand at 2367.661 kb on + strand at 2367.664 kb on - strand at 2367.754 kb on - strand at 2367.760 kb on + strand at 2367.765 kb on + strand, within Dshi_2244 at 2367.797 kb on - strand, within Dshi_2244 at 2367.819 kb on + strand, within Dshi_2244
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 2,364,501 + +1.6 2,364,507 - -0.2 2,364,509 + -0.2 2,364,509 + +0.0 2,364,517 - +0.0 2,364,530 + -0.2 2,364,530 + -0.5 2,364,538 - -0.5 2,364,538 - +0.2 2,364,538 - +0.0 2,364,538 - +0.3 2,364,538 - -0.4 2,364,538 - +0.5 2,364,588 + +0.4 2,364,596 - +0.5 2,364,598 + -0.3 2,364,665 - Dshi_2241 0.16 -0.8 2,364,673 - Dshi_2241 0.17 -0.1 2,364,675 + Dshi_2241 0.17 +0.4 2,364,676 + Dshi_2241 0.17 -1.2 2,364,684 - Dshi_2241 0.18 +0.4 2,364,689 - Dshi_2241 0.18 -0.4 2,364,689 - Dshi_2241 0.18 -0.4 2,364,710 + Dshi_2241 0.20 -0.5 2,364,714 - Dshi_2241 0.21 -0.8 2,364,781 + Dshi_2241 0.27 +0.6 2,364,781 + Dshi_2241 0.27 +0.6 2,364,893 - Dshi_2241 0.38 -1.4 2,364,899 + Dshi_2241 0.39 +0.1 2,364,907 - Dshi_2241 0.40 +1.2 2,364,907 - Dshi_2241 0.40 -0.8 2,364,935 - Dshi_2241 0.42 -0.1 2,364,963 + Dshi_2241 0.45 -0.6 2,365,027 - Dshi_2241 0.51 +0.0 2,365,089 + Dshi_2241 0.57 -0.4 2,365,097 - Dshi_2241 0.58 -0.4 2,365,097 - Dshi_2241 0.58 -0.2 2,365,160 - Dshi_2241 0.64 -0.5 2,365,183 + Dshi_2241 0.66 +0.4 2,365,217 + Dshi_2241 0.69 -1.3 2,365,245 + Dshi_2241 0.72 -0.3 2,365,245 + Dshi_2241 0.72 -0.1 2,365,303 - Dshi_2241 0.78 -0.1 2,365,306 - Dshi_2241 0.78 +0.0 2,365,313 - Dshi_2241 0.79 +0.0 2,365,381 - Dshi_2241 0.85 +0.1 2,365,438 - -0.5 2,365,466 + +0.9 2,365,563 + -0.8 2,365,570 - -0.1 2,365,680 - Dshi_2242 0.14 -0.3 2,365,761 + Dshi_2242 0.20 -0.4 2,365,946 - Dshi_2242 0.34 -0.3 2,365,960 - Dshi_2242 0.35 -0.4 2,365,977 - Dshi_2242 0.36 +1.6 2,366,004 + Dshi_2242 0.38 +0.6 2,366,139 - Dshi_2242 0.49 +0.0 2,366,167 - Dshi_2242 0.51 +0.4 2,366,304 - Dshi_2242 0.61 +0.2 2,366,314 - Dshi_2242 0.62 -1.6 2,366,391 - Dshi_2242 0.68 -1.2 2,366,457 + Dshi_2242 0.73 -0.2 2,366,473 + Dshi_2242 0.74 +0.6 2,366,499 + Dshi_2242 0.76 +0.0 2,366,499 + Dshi_2242 0.76 -0.1 2,366,524 + Dshi_2242 0.78 -2.0 2,366,609 + Dshi_2242 0.84 -0.3 2,366,618 - Dshi_2242 0.85 +0.2 2,366,736 - +0.0 2,366,803 + +0.1 2,366,824 - -0.3 2,366,839 - -0.8 2,366,847 - -0.3 2,366,930 + +0.6 2,366,969 + -0.3 2,366,989 + Dshi_2243 0.10 +0.4 2,367,003 + Dshi_2243 0.12 -0.1 2,367,007 + Dshi_2243 0.13 -1.6 2,367,056 - Dshi_2243 0.19 -1.2 2,367,106 + Dshi_2243 0.26 +1.3 2,367,166 - Dshi_2243 0.34 +0.8 2,367,171 + Dshi_2243 0.35 +0.2 2,367,234 - Dshi_2243 0.43 -0.7 2,367,234 - Dshi_2243 0.43 -0.4 2,367,320 + Dshi_2243 0.54 -0.8 2,367,328 - Dshi_2243 0.55 -2.8 2,367,328 - Dshi_2243 0.55 +0.8 2,367,347 - Dshi_2243 0.58 -0.2 2,367,375 - Dshi_2243 0.62 +0.0 2,367,399 + Dshi_2243 0.65 +0.1 2,367,516 - Dshi_2243 0.80 -0.1 2,367,516 - Dshi_2243 0.80 -0.5 2,367,516 - Dshi_2243 0.80 -0.4 2,367,521 - Dshi_2243 0.81 -0.4 2,367,630 + -1.4 2,367,661 + -0.7 2,367,664 - -0.7 2,367,754 - -0.7 2,367,760 + +1.0 2,367,765 + Dshi_2244 0.10 -1.2 2,367,797 - Dshi_2244 0.17 -1.0 2,367,819 + Dshi_2244 0.22 -1.9
Or see this region's nucleotide sequence