Experiment: m.b. Cisplatin 0.025 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1395 and Dshi_1396 are separated by 9 nucleotides Dshi_1396 and Dshi_1397 are separated by 154 nucleotides Dshi_1397 and Dshi_1398 are separated by 131 nucleotides Dshi_1398 and Dshi_1399 are separated by 80 nucleotides
Dshi_1395: Dshi_1395 - acetyl-CoA carboxylase, biotin carboxylase (RefSeq), at 1,447,094 to 1,448,440
_1395
Dshi_1396: Dshi_1396 - acetyl-CoA carboxylase, biotin carboxyl carrier protein (RefSeq), at 1,448,450 to 1,448,977
_1396
Dshi_1397: Dshi_1397 - Phospholipase/lecithinase/hemolysin-like protein (RefSeq), at 1,449,132 to 1,450,748
_1397
Dshi_1398: Dshi_1398 - Domain of unknown function DUF1791 (RefSeq), at 1,450,880 to 1,451,332
_1398
Dshi_1399: Dshi_1399 - acetate--CoA ligase (RefSeq), at 1,451,413 to 1,453,374
_1399
Position (kb)
1449
1450
1451 Strain fitness (log2 ratio)
-1
0
1
2 at 1449.099 kb on + strand at 1449.116 kb on - strand at 1449.190 kb on + strand at 1449.212 kb on + strand at 1449.264 kb on - strand at 1449.295 kb on - strand, within Dshi_1397 at 1449.442 kb on + strand, within Dshi_1397 at 1449.573 kb on + strand, within Dshi_1397 at 1449.573 kb on + strand, within Dshi_1397 at 1449.578 kb on + strand, within Dshi_1397 at 1449.670 kb on + strand, within Dshi_1397 at 1449.702 kb on + strand, within Dshi_1397 at 1449.754 kb on - strand, within Dshi_1397 at 1449.984 kb on - strand, within Dshi_1397 at 1449.994 kb on - strand, within Dshi_1397 at 1450.083 kb on + strand, within Dshi_1397 at 1450.132 kb on - strand, within Dshi_1397 at 1450.213 kb on - strand, within Dshi_1397 at 1450.556 kb on + strand, within Dshi_1397 at 1450.675 kb on - strand at 1450.750 kb on - strand at 1450.922 kb on + strand at 1450.952 kb on - strand, within Dshi_1398 at 1450.987 kb on + strand, within Dshi_1398 at 1450.992 kb on - strand, within Dshi_1398 at 1451.010 kb on + strand, within Dshi_1398 at 1451.013 kb on + strand, within Dshi_1398 at 1451.042 kb on - strand, within Dshi_1398 at 1451.088 kb on - strand, within Dshi_1398 at 1451.088 kb on - strand, within Dshi_1398 at 1451.165 kb on - strand, within Dshi_1398 at 1451.213 kb on - strand, within Dshi_1398 at 1451.316 kb on - strand at 1451.316 kb on - strand at 1451.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cisplatin 0.025 mg/ml remove 1,449,099 + -1.0 1,449,116 - -1.0 1,449,190 + -0.7 1,449,212 + +0.4 1,449,264 - -0.2 1,449,295 - Dshi_1397 0.10 +0.7 1,449,442 + Dshi_1397 0.19 -0.4 1,449,573 + Dshi_1397 0.27 -0.4 1,449,573 + Dshi_1397 0.27 -0.3 1,449,578 + Dshi_1397 0.28 +1.4 1,449,670 + Dshi_1397 0.33 -0.7 1,449,702 + Dshi_1397 0.35 +0.1 1,449,754 - Dshi_1397 0.38 +0.1 1,449,984 - Dshi_1397 0.53 -0.3 1,449,994 - Dshi_1397 0.53 +1.9 1,450,083 + Dshi_1397 0.59 -0.3 1,450,132 - Dshi_1397 0.62 +0.1 1,450,213 - Dshi_1397 0.67 +0.5 1,450,556 + Dshi_1397 0.88 +0.6 1,450,675 - -0.5 1,450,750 - -0.7 1,450,922 + +0.8 1,450,952 - Dshi_1398 0.16 +0.6 1,450,987 + Dshi_1398 0.24 +0.0 1,450,992 - Dshi_1398 0.25 +0.4 1,451,010 + Dshi_1398 0.29 +0.1 1,451,013 + Dshi_1398 0.29 -0.0 1,451,042 - Dshi_1398 0.36 +0.6 1,451,088 - Dshi_1398 0.46 +0.4 1,451,088 - Dshi_1398 0.46 -0.6 1,451,165 - Dshi_1398 0.63 -0.3 1,451,213 - Dshi_1398 0.74 +1.0 1,451,316 - -1.3 1,451,316 - +0.4 1,451,316 - -0.3
Or see this region's nucleotide sequence